Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0418 ATGACGAACCAGAATCTTGTGGTTCCTGATGTAAAATCACGTATTAACACCATTATTGAGGTGGCTGTGTCCATTTCTAACTCGCCTATCATGCCAAGCACGGCAGTACCAGAATCTCTGGTCGTGCTTGGTGGGATTTTTGGAAAAAAGATAATGAAGAGGCTTGACGATGGAGGAGGAAAAGGTGGAGCCAAGGTCAATGCCTGGATTGATTCAATGAGAGCTTCCTCTCCCACACGTGCCAAATCCTCCCTTCCTGCTTCCCAAAATCAAAACTTGAGTTCTTGGGCTCTTCAGCATCCTTCTGCGATCAACATGTTTGATCAGATAATCAGTAAGTCAAAAGATAAACAAATAGTAATCTTCCTTGACTACGATGGAACTCTCTCCCCAATTGTTGCAGACCCTGATAAAGCATTCATGACTAAGAAGATGAGAGCAACGGTGAAGGATGTTGCAAAACACTTTCCCACAGCCATTGTGAGTGGAAGGCGGAGAGACAAGGTTTACAAGTTTGTGAGATTAGCAGAGCTGTACTATGCAGGCAGCCATGGCATGGACATCCAAGGACCTAAGAAAGGTAATCAAGCAGCCCCGTTCCAGCCTGCAAGCCAATTCTTGCCCATGATCAACGAGGTTTACAAGATCTTGTTGGAGAAGACAAAATCTGTGGAAGGGGCTAAGGTTGAGAATAACAAGTTTTGCCTGTCCGTGCACTTTCGTTGCGTTGACGAAAAGAGCTGGGTTGCACTGGCAGAGGAAGTCCGACTAGTTCTGAATCAGTACCCAAAACTTAGGCTGACACAAGGGAGAAAAGTGCTCGAGATCCGACCCACCATCAAATGGGACAAAGGCAAAGCTCTTGAATTTTTGTTACGTTCTCTTGGATTCGCCAATTCGAAGGATGTTTTTCCCATCTACGTCGGCGATGATCGAACCGACGAGGATGCTTTTAAGGTGTTACGTGGGAGAGAGCAAGGGGCGGGAATTCTTGTATCTAAAGTTCCCAAAGAAACAGAAGCTTCCTATACTTTACAAGACCCATCAGAGGTAGAGCAATTTTTGCGGCGTTTGGTAGACTGGAAAAGGACGAGTAATGAGAGTGGACGGAGAGTTGAGTAG 1122 0.4572 MTNQNLVVPDVKSRINTIIEVAVSISNSPIMPSTAVPESLVVLGGIFGKKIMKRLDDGGGKGGAKVNAWIDSMRASSPTRAKSSLPASQNQNLSSWALQHPSAINMFDQIISKSKDKQIVIFLDYDGTLSPIVADPDKAFMTKKMRATVKDVAKHFPTAIVSGRRRDKVYKFVRLAELYYAGSHGMDIQGPKKGNQAAPFQPASQFLPMINEVYKILLEKTKSVEGAKVENNKFCLSVHFRCVDEKSWVALAEEVRLVLNQYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLRSLGFANSKDVFPIYVGDDRTDEDAFKVLRGREQGAGILVSKVPKETEASYTLQDPSEVEQFLRRLVDWKRTSNESGRRVE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0418 373 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 59 367 IPR044651 GO:0004805|GO:0005992
Mibi05g0418 373 CDD HAD_TPP 120 351 - -
Mibi05g0418 373 Gene3D - 119 201 IPR023214 -
Mibi05g0418 373 Gene3D - 202 372 IPR023214 -
Mibi05g0418 373 TIGRFAM T6PP: trehalose-phosphatase 117 359 IPR003337 GO:0003824|GO:0005992
Mibi05g0418 373 Pfam Trehalose-phosphatase 122 349 IPR003337 GO:0003824|GO:0005992
Mibi05g0418 373 SUPERFAMILY HAD-like 120 362 IPR036412 -
Mibi05g0418 373 FunFam Trehalose 6-phosphate phosphatase 209 368 - -
Mibi05g0418 373 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 322 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0418 Mibi-ChrMibi05 4017994 4019931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0418 115 360 Trehalose Biosynthesis Gene Families AT1G70290 27.863 1.29e-12 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2296 08 40702830 40706004 Mibi05g0418 05 4017994 4019931 CCT
Mibi05g0418 05 4017994 4019931 Mibi05g0418 05 4017994 4019931 ECH