Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0404 ATGGGGAATCCAGCTGATGAAACCCATGAAACAAAAGAGATAGATGCTTCAAGTTTTTCAACTTCACAGGATACGGTACCATACCCTCACAAAGTGGGAATTCCTCCAAGTCAGAACATGTTCAAGGAATTCCAATCCGTTGTCAAAGAAACATTCTTTGCTGATAATCCTCTACGTTCTTTCAAAGATCAGACTAAATTCCGGAAATTCATTCTTGGCATTGAAGCTGTATTCCCCATAATTAACTGGGGAAGAAATTATAATGCTGCAAAATTCAGAGGAGATATCATAGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTGGCTCCAGAGTACGGGCTGTATTCCAGCTTTGTTCCCCCACTGATATATGCTATCATGGGTAGTTCTCGTGATATTGCCATAGGACCTGTGGCAGTGGTTTCTCTCTTGCTAGGAACCTTACTTCAGAATGAGATTGATCCTATTGCGCATCCATCTGAATATCGAAGACTTGCTTTCACAGCTACCTTTTTTGCTGGAGTTACTCAAGCAACTCTTGGGATCTTCAGGTTAGGTTTTTTGATCGACTTCCTGTCCCATGCTGCTATTGTTGGTTTTATGGCTGGAGCCGCTATCACCATTGCCCTTCAACAGCTTAAGGGTTTCCTTGGCATTAAAACGTTCACAAAGAAAACTGATGTTGTGTCTGTATTGAATTCAGCATTTTCAACAGCTCATCATGGTTGGAACTGGCAGACTATAGTTATAGGAGCAAGCTTTTTGGGTTTTCTGCTGCTTGCAAAATATATCGGCAAAAAGAACAAGAAATTCTTCTGGGTGCCAGCTATCGCCCCATTGACATCTGTTGTTCTCTCCACTTTAATTGTTTTCGTAACCCGTGCAGACAAGCAAGGTGTTGAAATCGTAAAACACATAAAGAAGGGGATCAATCCTTCATCTGTTCATGAGATATATTTTACTGGTGAATTCCTTGCCAAAGGTTTCAAGATTGGCATTGTAGCTGGAATGATAGCGTTGACAGAAGCCACAGCAATAGGAAGAACATTTGCTTCTATGAAAGATTATCAGTTGGATGGAAATAAAGAAATGACAGCATTAGGAGCGATGAATATTGTTGGTTCAATGACTTCCTGCTATGTAGCAACAGGTTCTTTTTCTCGGTCAGCGGTAAATTACATGGCTGGCTGCCAAACTGCAGTATCTAATATTATTATGTCCATTGTTGTGTCCTTAACCCTTCTATTCATTACACCTCTATTCAAGTATACCCCAAATGCCATTCTTTCTGCCATCATCATATCGGCTGTGATCGGCCTTGCGGACTATCCGGCAGCAATTTTAATTTGGAAGATTGATAAATTCGATTTCATTGCTTGCATGGGAGCCTTCTTTGGGGTTGTTTTTGTCTCTGTTGAGATAGGACTTTTAATTGCTGTCTCTATATCATTTGCTAAAATCCTATTACAAGTTACCAGACCACGAACAGCTATTTTGGGGAAGATTCCTGGGACAACTGTCTATAGAAATATCCAACAATACCCGGCGGCTACAAAGGTTCCTGGTGTGCTGGTTGTTAGAATTGATTCTGCCATATACTTTTCCAATTCCAACTATGTTAAAGAAAGGATATTGAGGTGGTTGACAGATGAGGAAGAAAGAGTGAAAGGAGATTACCAAACACAGATCCAATTTTTAATAGTCGACATGTCACCGGTTACTGATATTGATACCAGTGGCATTCATTCCTTTCAAGAGTTACACGGAAGTCTTCAGAAGAGAGATGTACAGCTTGTTCTTGCAAACCCAGGACCAGTAGTGATAAACAAGCTTCATACCTCCAATTTCGCGAATCAGATTGGTGAGGACAAGATCTATCTCACAGTTGCAGATGCTGTTGCATACTGTTCTCCAAAGTTGGCAGAAGAGCCTTGA 1968 0.408 MGNPADETHETKEIDASSFSTSQDTVPYPHKVGIPPSQNMFKEFQSVVKETFFADNPLRSFKDQTKFRKFILGIEAVFPIINWGRNYNAAKFRGDIIAGLTIASLCIPQDIGYAKLANLAPEYGLYSSFVPPLIYAIMGSSRDIAIGPVAVVSLLLGTLLQNEIDPIAHPSEYRRLAFTATFFAGVTQATLGIFRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKTFTKKTDVVSVLNSAFSTAHHGWNWQTIVIGASFLGFLLLAKYIGKKNKKFFWVPAIAPLTSVVLSTLIVFVTRADKQGVEIVKHIKKGINPSSVHEIYFTGEFLAKGFKIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMTALGAMNIVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIIMSIVVSLTLLFITPLFKYTPNAILSAIIISAVIGLADYPAAILIWKIDKFDFIACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPGTTVYRNIQQYPAATKVPGVLVVRIDSAIYFSNSNYVKERILRWLTDEEERVKGDYQTQIQFLIVDMSPVTDIDTSGIHSFQELHGSLQKRDVQLVLANPGPVVINKLHTSNFANQIGEDKIYLTVADAVAYCSPKLAEEP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0404 655 MobiDBLite consensus disorder prediction 1 29 - -
Mibi05g0404 655 Pfam STAS domain 525 643 IPR002645 -
Mibi05g0404 655 TIGRFAM sulP: sulfate permease 79 643 IPR001902 GO:0016020|GO:0055085
Mibi05g0404 655 PANTHER SULFATE TRANSPORTER 39 648 IPR001902 GO:0016020|GO:0055085
Mibi05g0404 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Mibi05g0404 655 SUPERFAMILY SpoIIaa-like 527 648 IPR036513 -
Mibi05g0404 655 FunFam Sulfate transporter 31 504 650 - -
Mibi05g0404 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Mibi05g0404 655 Gene3D STAS domain 504 651 IPR036513 -
Mibi05g0404 655 Pfam Sulfate permease family 92 472 IPR011547 GO:0016020
Mibi05g0404 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0404 Mibi-ChrMibi05 3864559 3868355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0404 2 654 Inorganic Solute Cotransporters AT1G22150 74.579 0.0 986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2307 08 40807582 40811361 Mibi05g0404 05 3864559 3868355 CCT
Mibi05g0404 05 3864559 3868355 Mibi05g0404 05 3864559 3868355 ECH