Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0392 ATGTTTTGCACTGTCCCTACAGAGTTAATGGCACTAAACTACAAAATTTCTGGCCCCCCATCAAATTGGGAGGAGACAGATCGGACGTCTGCAAGGAATTTGCCGGATTCTGAAGTGGGGCCGCTTGATGACGTGGAATCATTTGTGGGGCCATGGGAAGGTCACGACGTTAACAAGAAGTTGAGGCTTTTAAAAGGAGCTTCTTTAATCCTAGAAGGGGAAGGAAAAAAAATAAAAAAGAGGAAAAGTAGGTTTGGTTCCTGTTTTGGATTGGGGAAAACTCGCCTTTTCCGGCAAAAAAATATGTCTATGAGTTCTCCATCAACTCAACTTGTCATCTCAAAAAGGATGGGCATATATGAGCCATTCCAGCAAGTCAGCATGTGGGCGGACAACTTTAAAGTTGAAAATAGCCTAAATCCAGGGCCTTCCCAGATGTTCATGGTGAACCCTACCACAGAGCCTAAGGCTGAATATATTCCTCATGAATCAACGGGACACTCGGGAGATGATCAAGAGGCCAACACTGCTGTTAGCAAGATGCTAAGACGCTTAGAACAGAATCGCGAAGCAGCTCGAAAAAGTCGTCAAAGGAAAAAGGCCTATGTCCAACAATTAGAAACAAGCCGTTTGAAGCTCATGCAATTGGAGCTAGAGATTGAGAAAGCAAAAAAGCAGGGTCTGTATATGGCCGGGTCAGCAGATGTTACTTTTATGGGATCATCTGCAGCAATAAACCCAGGGATTGCAACTTTTGAGATGGAATATGGTCAATGGGTTGAAGAGCAACACAGACAAAATGCAGAACTTAGAAACGCATTGCAAACTCAGTCATCTGATGTGCAGCTCCATCTTCTGGTTGAGAGTTACTTGAACCATTACTCAAACCTTTTCAGGATGAAAGCTGACGCCACAAAGGCTGATGTCTTTTACTTGATCTCCGGTGTATGGAAGTCATCCGTGGAACGTCTCTTCCTCTGGATCGGTGGATCCCGCCCTTCTCAGCTTCTTAATATCATCGTGCCGCAGTTGGAGGGTTTGACAGATCAACAGATAGCGAGTTGCACCAAACTCCGGCAATCTTCACAACAAGCTGAAGATGCTTTTTCACAAGGACTTGATAAACTACAGCAGAATCTGGTCCTCAACACGGCAGCCGATGCATTCGACATGGGCAGCTTTGGATTTCAGATGACTTCTCTCACGGAGAAAATTGAAGCACTAGAGGGTTTTGTAAACCAGGCTGATCACCTTCGACAAAAAGCGTTGCAACATATGTCCCGGATCCTGTCAGCCCGACAAGCGGCTCAAGGCTTGCTGATTTTAGGCGAATACTTCCAGCGTCTTCGTGCTCTTAGTTCTCTTTGGTCGGATCGTCCAAACGATCCTACATTCCAAACTTGA 1404 0.4537 MFCTVPTELMALNYKISGPPSNWEETDRTSARNLPDSEVGPLDDVESFVGPWEGHDVNKKLRLLKGASLILEGEGKKIKKRKSRFGSCFGLGKTRLFRQKNMSMSSPSTQLVISKRMGIYEPFQQVSMWADNFKVENSLNPGPSQMFMVNPTTEPKAEYIPHESTGHSGDDQEANTAVSKMLRRLEQNREAARKSRQRKKAYVQQLETSRLKLMQLELEIEKAKKQGLYMAGSADVTFMGSSAAINPGIATFEMEYGQWVEEQHRQNAELRNALQTQSSDVQLHLLVESYLNHYSNLFRMKADATKADVFYLISGVWKSSVERLFLWIGGSRPSQLLNIIVPQLEGLTDQQIASCTKLRQSSQQAEDAFSQGLDKLQQNLVLNTAADAFDMGSFGFQMTSLTEKIEALEGFVNQADHLRQKALQHMSRILSARQAAQGLLILGEYFQRLRALSSLWSDRPNDPTFQT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0392 467 Coils Coil 175 226 - -
Mibi05g0392 467 Pfam Seed dormancy control 268 341 IPR025422 GO:0006351|GO:0043565
Mibi05g0392 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Mibi05g0392 467 SUPERFAMILY Leucine zipper domain 180 213 IPR046347 GO:0003700|GO:0006355
Mibi05g0392 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 213 IPR004827 GO:0003700|GO:0006355
Mibi05g0392 467 SMART brlzneu 176 236 IPR004827 GO:0003700|GO:0006355
Mibi05g0392 467 Gene3D - 179 229 - -
Mibi05g0392 467 PANTHER TRANSCRIPTION FACTOR TGA9 104 461 - -
Mibi05g0392 467 Coils Coil 260 280 - -
Mibi05g0392 467 Pfam bZIP transcription factor 180 210 IPR004827 GO:0003700|GO:0006355
Mibi05g0392 467 ProSiteProfiles DOG1 domain profile. 249 459 IPR025422 GO:0006351|GO:0043565
Mibi05g0392 467 FunFam BZIP family transcription factor 179 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0392 Mibi-ChrMibi05 3787165 3791511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0392 102 464 Calmodulin-binding Proteins AT1G77920 54.762 2.21e-132 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi05g0392 DOG1 7.8e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0392 05 3787165 3791511 Mibi05g0392 05 3787165 3791511 ECH