Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0380 ATGACCGGAGACCGATGTCACCGGCGGAAGAAGATGAAGGGCAGGGATACGCCTTTCCCGGTTTCGACGGTCCCGGATGACTCCATGGGAACCAAACAGGGAAATTCTGATAATTCCACTGCACTTGAGATTGATTATTTCTCGCAGGCTGTGAAAACGCTCAGTGAGCGTTCGCCTTTTGATGTTGTTGCGGAAGAGAATTCAACCTCGACGGTTCCCACACTGCCCAGTGGGTGTGCAAGCTTGTTAAACCGCCATTCTGAGAGTCGTAGGCGTCGTAAGAAGTCCCATTCGGGTGTGGATAAGAAATCGTCTAGAGCATGTGAGAAGGCGCGTGGTCCAAGCATTTGGGTTGAGACTGAGGATTACTTTAGGGACTTGAAGTTGCCGGACATTGACACCTTGTTGGAGGCGTCATCGTCTTTTAGTTTAGCTGCTCGTAAGTGTTTTTCTATTCCTTCAGTGGGAAGTGCTCCAAGGTCAAATGTAGCTAGTTATGAGGATGACAAGGGGACTGGTGGAAACCTAAATAGTGAGGATGTGAAGAATGAGGACCGTGTCGTAGCAAGTGATAGTGTTGCAGCTGGAGGTTTGGTTCAGGATGACAAAGGTCATGATACTTTTGATTCGTCTAGTAGTTTAGAATGGCTTTTAGGATGTAGGAATAAGATTTCTCTGACTTCCGAGCGCCCTTCAAAGAGGAGGAAGCTTTTGGATGGTGAAGCTGGGTTGGGGAAATTTTTAATGGCCTGTACTGGCGATGGAGACTCCCCTCTGTGCCATTATTGCTGCAGGGAAGACGCCTGTAGAGAGTCTAATCAACTAATTGTTTGCGTCAATTGTAAAGTTGCAGTTCATAAGAAGTGCTATGGTGTGCTAGATGATGTAGAGGAGTCTTGGTTGTGCTCTTGGTGCAAGCAGAAGGATGGAATTGACGAAACGGTGAATCCTTGTGTGCTTTGTCCAAAGAAGGGTGGTGCCTTGAAGCCTGTTCATAGACACGATGAAAGTGCTGGGTATACGCAATTTGCTCACTTGTTTTGTTGTCTGTGGATGCCTGAGGTTTATATTGAAGATTTGAAGAAGATGGAGCCTGTTATGAATGTAGGAGGAGTCCAGGAAACCAGGAAAAAATTAGTCTGTAATATTTGCAAGGTGAAGTTTGGCGCATGTATTCGATGCAGCCATGGATCCTGCAGATCTTCTTTCCACCCTTTATGTGCTAGGGAAGCTAGCTACAAGATGGAGGTTTGGGCTAAAAATGGTCATGACAATATTGAGTTGCGGGCCTTTTGTTCTAAGCACTCAGATATACTAGAGAACAGTGCCATCTTCACTTCAGAATGCGGTGGTTTACCGCAACTAAATAATACTGCTGTGGTGGGGAGGACTGATGAAATTGCCAATGCATCTGACTCCCTTGGTTTTGCACTTGTTTTGAAAAAGTTGGTAGATCGAGGAAAAGTTGATCTTAAAGATGTAGCTTTGGAGATTGGCGTTTCTCCAGATACATTAAGTGCAAATATTAATGATCCTTGCATGGCCCCTGATGTGCAACTTAAAATAGTCAACTGGCTAAAAGCCCATGTATATACCAATGCATTTCAGAAAAGTTTGAAAGTCAAATTGAAGCCTGCCAATTCATTAAAGGATGAAAATGGAATCGCTGATGGTTCTGATACTCTACAGACATCAGATTCTGAGTTGCCAGATCATGTTGCTGTTAAGTCGGCACCATCAAGGAGAATAACAACTGGTAATATCAGGATTTTGAAAGATAACAAAGCGATATGTTCAACTGGGGTGATATCCAGTGAGAACGGAATGTTAATGGACAAGGTCAAAGGAGGTCAATCTGAACTTGAAAATTCCAAAACATCGAATGAGGCATCCATTCCTGATGCAACTGAACCGAAATTAAACAAGTCTGAGGATGCTTCTTTTGATTCCCAAGGGATTGCTGATACACCTAGCAAAATAAGCTTATCTGGAGGTGTTTTGGAAGAAAAGCTTGCTGATGCTTCTAATTTTTCTGATCACCACCTCTCTTGTTCTTCTGTAGATTTACCTGCTGCAGATGTCATGAAGATTAAAGGAAACTCTTGTTACATTCACCCATACATCTATAAAAAGTTATCACAGATTCATGATGGGGTGCTTTCAAAGGATGTTATATGTCAAAGGGAGGAAGAAAATTTTTCTTTGGATGGATTCTCTGGAGCTAGTGGTGTCCCTAGTTACCAAAATCCAGAAGTAACTTGCAGTGACATTTGTAAGGCTGATAAAGTAAATGCGAAGCAATTGGTTATGGCTAGAAATCTGGGTTTACTAGAATCTTGTCCGAGTGATGAAGTGGAGGGTGAGCTACTATATTTTCAGCATAGATTATTGCAGAATGCAGTTGCAAGGAAGAAATTTGCTGATAATTTAATCTCTAGTATAGTTAAGAGTCTTCCGCAGGAGATTAGTGCAACACATCAGCAAAGATGGGATGCTGTACTGGTTAACCAGTATCTCCGTGATCTTAGGGAAGCAAAAAAGCAGGGCAGAAAAGAGAGAAGGCACAAAGAAGCACAGGCAGTGTTGGCTGCTGCAACTGCTGCTGCAGCATCATCATCCAGGGTTTCTTCGTTGCGGAAGGATACCTTTGAAGAATCTGTAGTGCCAGAGAATTTGTCAAAGAACACTCTAAGTGGAAGGACTGGTGTTTGCTCTCTGCCAATGCCACGGGCCAAAGAAACACTCTCAAGGGTAGCTATGGTTAGGACTTCATCAGATAAACATTCAGATTTTGGTCTGCCAGATGCAAATCTTTCTAAGGAGCATTCCAAATTATGTGATATCTGCAGACGAGCTGAAACTATATTGAACCCAATTCTCATCTGCTCTGGTTGCAAGGTTGCTGTTCACTTGGATTGCTATCGTAGTGTGAAAGAATTTACAGGTCCATGGTACTGTGAATTATGTGAAGATTTATCACTTAGAATATCTGGGCAACCTTCTATAAATTCATGGGAGAAACCTTATTTTGTTGCCGAGTGTGGGATATGTGGTGGTACTACTGGTGCTTACAGGAAGTCTTCAGATGGTCATTGGGTCCATGCCTTTTGTGCTGAGTGGGTTTTTGAGCCAACATTCAGACGAGGACAAGTAAATGCTGTTGAAGGAATGGAAACTGCGTTGAAAGGAGTTGACACTTGCTGCATCTGCCGCCGCAAGCATGGTATATGCTTAAAGTGTAGCTATGGCCATTGTCAAACTATGTTTCATCCATCCTGTGCTAGAAGTGCTGGTTTTTACATGAATGTGAGGGCTGCCAATGGCAAGCTGCAGCACAGGGCTTATTGTGAAAAGCATGGTTCAGAACAGAGGGCGAAGGCTGAAAGCCAAAAACATGGAATTGAAGAGTTGAAAAGTATCAAGCAAATTAGGGTTGAGTTAGAGAGATTACGTCTCCTGTGTGAAAGAATTGTCAAACGTGAAAAGATAAAGCGGGAATTGGTTTTATGTTCACACGACATACTTGCCTTCAAAAGGGATCATGTTGCTAGGTCTGTCCTGGTGCATAGCCCTTTCATCCTTCCTGATTGTAGTTCAGAATCAGCGACAACATCCCTTAAAGGGAACACAGAGGGATACAGATCATGCAGTGAAGCTGTCCAAAGGTCGGATGATGTAACTGTGGACAGCTCAGTTTCTGCTAAGCATAGAGTACAAGTTGCTGCCACCGTGGACAGTGACCCAAAGTTGGATGATGACTGTTCTACTACACACAGCCATTCTAATCATAAGATTCCTGAGAGGGTGCAGTTTTCTGGCAAGCAGATTCCTCACAGAGCTTCCATCATATCACGAAATCTTTCAGAAGACACTGGATGGAGATCAAAATCAAGAAAGCATCAAGAGGCATTTGGAAAGGAGCTGGTTATGACGTCAGACGAAGCATCTATGAAGAATTCAATGTTGCCGAAAGGATATGCATATGTTCCCGCCGATTGCTTGTCTAATGACGAGCGATCTAAGAATGATGAATTGACTGGCGAACCAGCGGGGCATGACGGGTAA 4065 0.4339 MTGDRCHRRKKMKGRDTPFPVSTVPDDSMGTKQGNSDNSTALEIDYFSQAVKTLSERSPFDVVAEENSTSTVPTLPSGCASLLNRHSESRRRRKKSHSGVDKKSSRACEKARGPSIWVETEDYFRDLKLPDIDTLLEASSSFSLAARKCFSIPSVGSAPRSNVASYEDDKGTGGNLNSEDVKNEDRVVASDSVAAGGLVQDDKGHDTFDSSSSLEWLLGCRNKISLTSERPSKRRKLLDGEAGLGKFLMACTGDGDSPLCHYCCREDACRESNQLIVCVNCKVAVHKKCYGVLDDVEESWLCSWCKQKDGIDETVNPCVLCPKKGGALKPVHRHDESAGYTQFAHLFCCLWMPEVYIEDLKKMEPVMNVGGVQETRKKLVCNICKVKFGACIRCSHGSCRSSFHPLCAREASYKMEVWAKNGHDNIELRAFCSKHSDILENSAIFTSECGGLPQLNNTAVVGRTDEIANASDSLGFALVLKKLVDRGKVDLKDVALEIGVSPDTLSANINDPCMAPDVQLKIVNWLKAHVYTNAFQKSLKVKLKPANSLKDENGIADGSDTLQTSDSELPDHVAVKSAPSRRITTGNIRILKDNKAICSTGVISSENGMLMDKVKGGQSELENSKTSNEASIPDATEPKLNKSEDASFDSQGIADTPSKISLSGGVLEEKLADASNFSDHHLSCSSVDLPAADVMKIKGNSCYIHPYIYKKLSQIHDGVLSKDVICQREEENFSLDGFSGASGVPSYQNPEVTCSDICKADKVNAKQLVMARNLGLLESCPSDEVEGELLYFQHRLLQNAVARKKFADNLISSIVKSLPQEISATHQQRWDAVLVNQYLRDLREAKKQGRKERRHKEAQAVLAAATAAAASSSRVSSLRKDTFEESVVPENLSKNTLSGRTGVCSLPMPRAKETLSRVAMVRTSSDKHSDFGLPDANLSKEHSKLCDICRRAETILNPILICSGCKVAVHLDCYRSVKEFTGPWYCELCEDLSLRISGQPSINSWEKPYFVAECGICGGTTGAYRKSSDGHWVHAFCAEWVFEPTFRRGQVNAVEGMETALKGVDTCCICRRKHGICLKCSYGHCQTMFHPSCARSAGFYMNVRAANGKLQHRAYCEKHGSEQRAKAESQKHGIEELKSIKQIRVELERLRLLCERIVKREKIKRELVLCSHDILAFKRDHVARSVLVHSPFILPDCSSESATTSLKGNTEGYRSCSEAVQRSDDVTVDSSVSAKHRVQVAATVDSDPKLDDDCSTTHSHSNHKIPERVQFSGKQIPHRASIISRNLSEDTGWRSKSRKHQEAFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDERSKNDELTGEPAGHDG 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 550 578 - -
Mibi05g0380 1354 ProSitePatterns Zinc finger PHD-type signature. 946 989 IPR019786 -
Mibi05g0380 1354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 310 IPR013083 -
Mibi05g0380 1354 SMART PHD_3 945 990 IPR001965 -
Mibi05g0380 1354 SMART PHD_3 259 306 IPR001965 -
Mibi05g0380 1354 SMART PHD_3 1066 1120 IPR001965 -
Mibi05g0380 1354 SMART PHD_3 380 436 IPR001965 -
Mibi05g0380 1354 SUPERFAMILY FYVE/PHD zinc finger 937 990 IPR011011 -
Mibi05g0380 1354 ProSiteProfiles Extended PHD (ePHD) domain profile. 1011 1120 IPR034732 -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 65 84 - -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 1336 1354 - -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 155 179 - -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 65 107 - -
Mibi05g0380 1354 PANTHER PHD FINGER PROTEINS 49 882 - -
Mibi05g0380 1354 CDD ePHD 1014 1119 - -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 620 634 - -
Mibi05g0380 1354 Pfam PHD-finger 957 990 - -
Mibi05g0380 1354 Pfam PHD-finger 273 306 - -
Mibi05g0380 1354 ProSiteProfiles Zinc finger PHD-type profile. 943 992 IPR019787 -
Mibi05g0380 1354 Coils Coil 1140 1160 - -
Mibi05g0380 1354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 923 995 IPR013083 -
Mibi05g0380 1354 SUPERFAMILY FYVE/PHD zinc finger 253 307 IPR011011 -
Mibi05g0380 1354 ProSiteProfiles Extended PHD (ePHD) domain profile. 315 436 IPR034732 -
Mibi05g0380 1354 Pfam PHD-zinc-finger like domain 1013 1119 - -
Mibi05g0380 1354 Pfam PHD-zinc-finger like domain 317 435 - -
Mibi05g0380 1354 Coils Coil 839 859 - -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 615 655 - -
Mibi05g0380 1354 ProSiteProfiles Zinc finger PHD-type profile. 257 308 IPR019787 -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 1334 1354 - -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 1 41 - -
Mibi05g0380 1354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1011 1122 IPR013083 -
Mibi05g0380 1354 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 311 438 IPR013083 -
Mibi05g0380 1354 MobiDBLite consensus disorder prediction 24 41 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0380 254 440 C2H2 Transcription Factor Family AT3G14740 31.579 2.97e-17 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mibi05g0380 zf-HC5HC2H_2 1.9e-23 CL0390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0380 05 3698352 3714429 Mibi05g0380 05 3698352 3714429 ECH