Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0371 ATGAGCAAACCCAGAACCCAAAGGAAAGACTCCAAACATGTCAACCGAAACCAGAATCAGCCACCCCAGAAGACAGAGAAACAAGCCTCTTGGGCGGCAATAAGAGGCTTTTTGCCTTGTAGAAGTGTCCAAATTCAGCAGCCGCAGCTGGAAGTGAAGAAACCGAAGCAGAAACAAGAGCAAAGGAAGCTCCAAGAAGAAGAAGAGGAGGAGGAAGCAGTTTTAGAAGAAAGCAGAAAGAAGTGCAAGAAAATGAGATGTTCTGGTTCACTTTGTAATAACACCAAGATCATGGCAAGGCCTGAAGCAGTGTCTCTTGACATCAATAAGGTTAAAAGAGCAAACAATGATGCTTCTCATTCTAACAGATCCTTGAAAGCTCCTCTTCATGAACTTAATGGGGTGGTTGCTTCAGCCTCTTCTTCAAACTCTTCTGTGAGTGGTTCTTTTAGGGGAATGCCATTCAGGAGATTCTCTGGCTGCTATGAGTGTAGAATGGTGGTTGACCCTCTTCTTCCTTTCAGTAGAGACCCTTCTCTCAGAAGCAGCATTTACCCATGTCCTCACTGTGGTGAGATCTTCATGAAACCTGAAAATCTGGAGCTTCATCAGGCTGTTAAACATGCAGTATCTGAACTGGGTCCAGAAGATACGAGCAAGAACATAGTGGAAATCATATTCCACTCAAGCTGGCTAAAGAAACAATCTCCAGTCTGCAAGATAGACCGAATCCTTAAAGTCCACAACACACAGAGGACAATCACCAAATTCGAAGAGTACAGAGAGTCCATCAAAGCCAAGGCCATGAAGCTTCCAAAGAAGCACCCTCGTTGCATAGCAGATGGAAACGAGCTACTTAGGTTCCATTGCACAACCTCTTTATGCTCACTGGGCCTAAAAGGCTCCACTAACCTCTGTAACTCAATACCACAATGCAATATATGTGGCATAATCAAGAATGGCTTCAAGGTGGTCGCCGGCGGAAAAGAGATATTGACGACGGCGACAAGTGGGAAAGCACATGACAAAGCAGAGGTTTCAGGTGAAGAGAATAATGAGAAGAGAGCAATGTTGGTGTGCAGGGTGATAGCAGGGAGGGTGAAGAAGAATGTAGAAGGAGGAGGAATAATGAGTACGGAGGAGTATGATTCTTTTGCAGGGGAAGTTGGGGCTTATTCCAATTTAGAAGAGTTGTATGTGTCCAATCCTAGAGCTATTTTGCCTTGCTTCGTTGTATTCTACTCTGGTTTTTGA 1254 0.445 MSKPRTQRKDSKHVNRNQNQPPQKTEKQASWAAIRGFLPCRSVQIQQPQLEVKKPKQKQEQRKLQEEEEEEEAVLEESRKKCKKMRCSGSLCNNTKIMARPEAVSLDINKVKRANNDASHSNRSLKAPLHELNGVVASASSSNSSVSGSFRGMPFRRFSGCYECRMVVDPLLPFSRDPSLRSSIYPCPHCGEIFMKPENLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQRTITKFEEYRESIKAKAMKLPKKHPRCIADGNELLRFHCTTSLCSLGLKGSTNLCNSIPQCNICGIIKNGFKVVAGGKEILTTATSGKAHDKAEVSGEENNEKRAMLVCRVIAGRVKKNVEGGGIMSTEEYDSFAGEVGAYSNLEELYVSNPRAILPCFVVFYSGF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0371 417 MobiDBLite consensus disorder prediction 1 29 - -
Mibi05g0371 417 ProSiteProfiles Zinc finger C2H2 type domain profile. 185 213 IPR013087 -
Mibi05g0371 417 SUPERFAMILY ADP-ribosylation 210 416 - -
Mibi05g0371 417 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 83 414 - -
Mibi05g0371 417 Coils Coil 56 81 - -
Mibi05g0371 417 ProSitePatterns Zinc finger C2H2 type domain signature. 187 208 IPR013087 -
Mibi05g0371 417 MobiDBLite consensus disorder prediction 50 73 - -
Mibi05g0371 417 SMART c2h2final6 185 208 IPR013087 -
Mibi05g0371 417 MobiDBLite consensus disorder prediction 1 15 - -
Mibi05g0371 417 Gene3D - 209 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0371 Mibi-ChrMibi05 3597800 3599175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0371 150 414 C2H2 Transcription Factor Family AT1G75710 52.740 2.24e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi05g0371 None None None