Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0351 ATGCATGAGGAAAAGAGGCTCCTTGACGCGGTTTTAGAGCTGAGTACAGAGAAGCAACAGCTGGTCTCGTTTCGCTACTGTTTTAGACTGCGCTCTTTAGCTAGAATGGTGAAGAGAGGGCACAAGATCCACACAGAGACATCATCAAAGGCAATGCAAGGTCAAATTTCTTCATCAGATGGGAAAAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGTTCATGGGTTTCAGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTGGGATCTTATTCAACCCCAGAGGCTGCAGCTAGAGCCTATGATGCTGCACTTTTATGCCTTAAGGGATCTTCAGCTAATCTCAACTTCCCTTCAAGCTATTCACATTACATTCCCCAAGACACAGCCATGTCTCCTAAATCTATCCAAAGAGTTGCTGCAAATGCTGCTAATAGTTTTTCTGATGAAAATGCCACAACCCCACCTTCTCCTTCTCCTACTGCCTCTGCCTCTGCCTCAACCTCAGCCTCATCTTCGTCACTTGTATCATCCCCATCAATGTCAACCTCTGATCATATCGACGATGATGTCTCATTAATCTCGTCATTTGGTGGGGCATACACTAGTGGTGATCAGACTAGTGAATCTATCTCATTCATGGATTCTTATTGGTACAGCTTTGATGATTTACAATCCCCAAAGTATGTGAATCAAATGCTCGGTGGTAATCTGTTTGATATTGATCCAAACCAGATGCTGGATGATTTTTGTGAGGACAGTGATATTCGTTTGTGGAGCTTCTGCTGA 798 0.4361 MHEEKRLLDAVLELSTEKQQLVSFRYCFRLRSLARMVKRGHKIHTETSSKAMQGQISSSDGKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSYSHYIPQDTAMSPKSIQRVAANAANSFSDENATTPPSPSPTASASASTSASSSSLVSSPSMSTSDHIDDDVSLISSFGGAYTSGDQTSESISFMDSYWYSFDDLQSPKYVNQMLGGNLFDIDPNQMLDDFCEDSDIRLWSFC 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0351 265 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 50 190 - -
Mibi05g0351 265 Pfam AP2 domain 64 113 IPR001471 GO:0003700|GO:0006355
Mibi05g0351 265 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Mibi05g0351 265 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Mibi05g0351 265 CDD AP2 63 123 IPR001471 GO:0003700|GO:0006355
Mibi05g0351 265 FunFam ethylene-responsive transcription factor ERF014-like 63 123 - -
Mibi05g0351 265 MobiDBLite consensus disorder prediction 148 173 - -
Mibi05g0351 265 SUPERFAMILY DNA-binding domain 64 123 IPR016177 GO:0003677
Mibi05g0351 265 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Mibi05g0351 265 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Mibi05g0351 265 Gene3D AP2/ERF domain 63 122 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0351 Mibi-ChrMibi05 3417089 3419078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0351 65 264 AP2-EREBP Transcription Factor Family AT1G21910 51.869 1.95e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi05g0351 AP2 3.8e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0351 05 3417089 3419078 Mibi05g0351 05 3417089 3419078 ECH