Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0320 ATGGAACAAGATAAGGGGAAACAGTCTTCCCACAAAACCCCATACACTGAGCTCGAGCAAGTTAACTCAGATTTCATCCTGGCAATTGCCATGCAAGAGCAAGAGGGAACCTTCACAATGCTCGCGACCTTGGACAGCGGAGAAAGCAGCAATGACGAAGAAGGTGAAAGCGAGTCCTCTTTCGAAGAAGACGACGACGACGGAGATGCTGATTTTTCCGAGAGCCAGGAATTCGAGTTAGGAGACCTTCAATTTCTTGAGGGCGAAGGAAGCAATGGAGAAGAAGAAGATGAAGATGAAGATATGGAAGAAGATGAGATTGATCCTGATGAAATGTCTTATGAAGAGTTGATTGAGTTGGCAGAGTTCATAGGAGAAGAGAGAAGAGGATTGTCAGCTAATGAAATCCCCTCATGCCTGCGTCCTTACACTTGCCATTTTGCAGAGAACAAGACAGGCATAGATAGGTGTGTGATATGTCAGGTTGAATACGAAGAAGGTGAAGCACTAATAGCACTTCATTGTGAGCACCCTTATCATTCAGATTGCATCACCAAGTGGCTTCAGATTAAGAAGGTTTGTCCAATTTGTAGCTGTGATGTCTCCACCCCAAAACTGGCTAGCAATCCTTAA 633 0.4471 MEQDKGKQSSHKTPYTELEQVNSDFILAIAMQEQEGTFTMLATLDSGESSNDEEGESESSFEEDDDDGDADFSESQEFELGDLQFLEGEGSNGEEEDEDEDMEEDEIDPDEMSYEELIELAEFIGEERRGLSANEIPSCLRPYTCHFAENKTGIDRCVICQVEYEEGEALIALHCEHPYHSDCITKWLQIKKVCPICSCDVSTPKLASNP 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0320 210 Pfam Ring finger domain 156 197 IPR001841 -
Mibi05g0320 210 ProSiteProfiles Zinc finger RING-type profile. 157 198 IPR001841 -
Mibi05g0320 210 SUPERFAMILY RING/U-box 156 204 - -
Mibi05g0320 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 209 IPR013083 -
Mibi05g0320 210 SMART ring_2 157 197 IPR001841 -
Mibi05g0320 210 MobiDBLite consensus disorder prediction 38 111 - -
Mibi05g0320 210 MobiDBLite consensus disorder prediction 49 76 - -
Mibi05g0320 210 FunFam E3 ubiquitin ligase BIG BROTHER-related 123 204 - -
Mibi05g0320 210 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 4 101 IPR043312 -
Mibi05g0320 210 MobiDBLite consensus disorder prediction 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0320 Mibi-ChrMibi05 3130732 3131364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0320 91 201 C3H Transcription Factor Family AT3G63530 45.614 5.00e-29 107