Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0317 ATGGAGGTGAAGTGGCGGCGGCGGTGGTGGTGGCCTATAGCACTAGTTTTAACGGCGGCTCTGGGCGGCGCCGAGGGAGGCAATGTCACGTACGACGGAAGGTCATTAATGGTCAACGGTCAACATAAAATCCTTTTCTCCGGCTCAATTCACTATCCTCGCAGCACTCCTCAGATGTGGCCTTCCTTAATTTCCAAAGCCAAAGAGGGAGGCATAGATGTCATTCAAACTTACGTATTTTGGAACCTTCATGAGCCTCAACAAGGCCAGTATGACTTCAGTGGAAGGCGTGATATAGTGAGGTTCATTAAGGAGATCCAAGCTCAAGGTTTATACGTGACCCTCAGAATTGGACCTTTCATTGAGAGTGAATGGACTTATGGAGGTTTACCAGTTTGGTTACATGACGTTCCGGGCATTGTTTTTAGATCAGATAATGAGCCATTCAAGTATCACATGCAAAAGTTCACTACCCAAATAGTCAACTTGATGAAATCCCACAATCTTTATGCTTCACAAGGAGGGCCTATCATACTATCACAGATTGAGAACGAGTATTCTACTATTGAAGCGAGTTTTCATGACCGAGGACCAAGCTATGTTCGTTGGGCTGCACAAATGGCCGTGGGGCTTCAAACTGGTGTGCCCTGGGTTATGTGCAAGCAAGATGATGCTCCTGATCCAGTGATCAACGCGTGCAATGGTATGGCATGTGGGAACACATTCAAGGGACCTAACTCGCCTCACAAACCTTCAATCTGGACAGAGAACTGGACAAGTTTCTATCAAGCCTTTGGTGACGAACCATACTTGAGATCAGCTGAAGATATTGCGTATAATGTTGCCTTGTTCGTTGCAAAGAAGGGAAGCTATGTCAACTACTATATGTACCATGGAGGAACAAATTTTGGAAGAACAGCTGCTGCTTTTATGGTTACAGCTTATTATGATGAAGCTCCTCTAGATGAATATGGTTTAATTAGGCAGCCAAAATGGGGTCATCTTAGAGACCTACATGCTGCTATCAAGTCCTGCTCAAAAACTTTGCTTTCTGCTACCCAGACTACTCTCAGCTTGGGCTGGAAACAGCAAGCTTATGTTTTCAGAAAGAGCAAATCAGAATGTGCTGCCTTTCTGGAAAATAGAGACAACAAAGAAGTCATTGTCAGATTTCAAAGCATTCCATACAAACTGCCTCCAGAATCAATTAGCATTCTCCCAGATTGCAGGAGTGTAGCCTTCAACACTGCCAAAGTGAGTGCAAAATACAGTATTAGAACAATGAACCCTGTAGTACATTTTAATTCAGCCCAACAATGGGAAGTGTACAGAGAAGCCATCCCTTACTTCGGTCGTACTACTTCAAGAGCAAACGGGCTAGTAGATCAGATCAGCACGGCAAAAGATAAATCTGACTATCTGTGGTATACTTTCAGTTTCCGCCAATCAAGTTCTCAGTCATTTCTTAGTGCATCTAGCCATGGACATGTTTTGCATGCTTTTGTCAACGGAGTTTTAGCAGGTTCTGCACATGGAAGTCACAACAATGTATCTTTCACCTTGAAGAGCAATATCAAATTGAGAAAAGGAGTCAATTATATTTCCTTCCTCAGTGCAACAGTTGGATTGCCGGATTCTGGAGCATACCTTGAGAGCAAAGTTGCTGGTTTGCGCAATGTCAGAGTCGGTGACACAGATTTCACTCATAGTTCCTGGGGTAATCAGGTTGGGCTATTAGGAGAAAAGTTGCAAATCTATACAGTAAGGGGATCAAGTAAAGTTCAGTGGAGAAGACTTGGAAGATCAAATCCACTGACGTGGTATAAGACCACATTCGATGCACCACCAGGAAACAATCCAATAGCACTTGATCTTAGTTCAATGGGGAAAGGTGAAGTTTGGGTTAATGGGGAGAGTGTTGGCCGATATTGGGTATCATTCATCACTCGTAAAGGAAATTCTTCGCAGAGATGGTACCATATCCCTCGATCCCTCCTGAAACCTTCTGGAAACTTGCTAGTTCTGTTCGAAGAAGAAACAGGGAACCCCCTTAGGATTTCTCTGGACACAGTTACTTTGTCCTGA 2085 0.4388 MEVKWRRRWWWPIALVLTAALGGAEGGNVTYDGRSLMVNGQHKILFSGSIHYPRSTPQMWPSLISKAKEGGIDVIQTYVFWNLHEPQQGQYDFSGRRDIVRFIKEIQAQGLYVTLRIGPFIESEWTYGGLPVWLHDVPGIVFRSDNEPFKYHMQKFTTQIVNLMKSHNLYASQGGPIILSQIENEYSTIEASFHDRGPSYVRWAAQMAVGLQTGVPWVMCKQDDAPDPVINACNGMACGNTFKGPNSPHKPSIWTENWTSFYQAFGDEPYLRSAEDIAYNVALFVAKKGSYVNYYMYHGGTNFGRTAAAFMVTAYYDEAPLDEYGLIRQPKWGHLRDLHAAIKSCSKTLLSATQTTLSLGWKQQAYVFRKSKSECAAFLENRDNKEVIVRFQSIPYKLPPESISILPDCRSVAFNTAKVSAKYSIRTMNPVVHFNSAQQWEVYREAIPYFGRTTSRANGLVDQISTAKDKSDYLWYTFSFRQSSSQSFLSASSHGHVLHAFVNGVLAGSAHGSHNNVSFTLKSNIKLRKGVNYISFLSATVGLPDSGAYLESKVAGLRNVRVGDTDFTHSSWGNQVGLLGEKLQIYTVRGSSKVQWRRLGRSNPLTWYKTTFDAPPGNNPIALDLSSMGKGEVWVNGESVGRYWVSFITRKGNSSQRWYHIPRSLLKPSGNLLVLFEEETGNPLRISLDTVTLS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0317 694 Pfam Glycosyl hydrolases family 35 35 341 IPR031330 -
Mibi05g0317 694 Gene3D - 556 693 - -
Mibi05g0317 694 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Mibi05g0317 694 FunFam Beta-galactosidase 574 694 - -
Mibi05g0317 694 Pfam Beta-sandwich domain in beta galactosidase 349 419 IPR041392 -
Mibi05g0317 694 FunFam Beta-galactosidase 25 346 - -
Mibi05g0317 694 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Mibi05g0317 694 SUPERFAMILY Galactose-binding domain-like 570 692 IPR008979 -
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 630 646 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 290 305 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 603 617 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 253 268 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 PANTHER BETA-GALACTOSIDASE RELATED 19 693 IPR001944 GO:0004553|GO:0005975
Mibi05g0317 694 SUPERFAMILY Galactose-binding domain-like 403 553 IPR008979 -
Mibi05g0317 694 Gene3D Glycosidases 25 346 - -
Mibi05g0317 694 FunFam Beta-galactosidase 295 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0317 Mibi-ChrMibi05 3117688 3123219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0317 13 693 Glycoside Hydrolase AT5G63800 60.694 0.0 896