Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0310 ATGTCAACCCAAAATCGACGTCCGTCGTTTTCCTCCTCGACGACGTCGTCTTTGGCAAAGCGGCATGCATCGTCGTCGGAGAATCCAGGGAAGGCTATGGCAGCTCCTCCTCCACACCTGGCTAAGAAGCGAGCGCCTCTCACTAACCTCACCAATCAAAAGAATGCGTCCCACTGTGCTTTGCGAAAGTCACTGCCACCATCTAATTTGGTACCGTACACAACCAAAATTACCCACACAAAGAAGAAATTCCCTGCTTGCAACTCAAGCTCAGCCACTTCCGGGAAAAAAGGGCTTACTTCGTCAAATGCTAAATCGACTCCGGTTGTTGCCCCCAAGGCCACTTCTTTCCCACAAAGGGATCAATCTGCTACTGCTACTGCTGCCCTTCCTTGCAGCATGGATATTTCTCCTATCAAATCTGATAGGATGTCAGTTTCTTTGGACGAGACAATGTCCACCTGTGATTCTTTCAAGAGTCACGAAATTGAATATATTGACAACAGTGACGTTTCAGCTCTTGATTTTATTGACAGAAAGACATTCAGCAATCTGAACATCTCTGATAAGACGGAGGCGCCAGCTAATATTTGTAGTAGAGACATGCTTGTTGGCTTGGAAAGAGATGGCAAATTTGTCAACATCGACGACAACTACTTAGATCCCCAGCTTTGTGCTCCCTATGCATGTGATATCTACAAGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGACATCAATCCCAACATGCGTGCTATATTAGTTGACTGGCTCGTGGAGGTGGCTGAGGAGTATAGGCTTGTGCCTGATACATTGTATTTGACAGTCAACTACATTGATCGGTATCTTTCAGGGAATGTGATGAGTAGGCAAAAGTTACAATTACTTGGTGTTGCCTGCATGATGATTGCTGCTAAATATGAGGAGATTTGTGCGCCTCAGGTGGAGGAATATTGTTATATAACTGATAACACTTACTTCAAAGAAGAGGTTTTGCAAATGGAATCAGCTGTCTTAAATTATCTAAAATTTGAAATGACAGCTCCGACAATAAAATGCTTCTTAAGACGATTTGTCCGTGCAGCTCAAGGAGTCAATGAGGTAGCATTATTACAATTAGAGTGCTTGACCAACTATATTGCTGAATTGTCCTTATTGGAATACACAATGCTCTGTTATGCCCCATCACTTATAGCTGCTTCTGCAATCTTCCTAGCAAAACTTATCCTTTTCCCTTCAGAAAAGCCATGGAATTCCACATTGCAGCATTACACACTCTACAATGCTTCTGATTTGCGTAACTGTGTGAAGGATCTGCATCTTCTATGTTATAATAGCCATAGTTCTAGCTTACCTGCAATCCGGGAGAAATACAGCCAACACAAGTACAAATATGTGGCAACGAAGTCGTGTCCTCCATCAATACCTCGAGAACTTTTCCAAAGTTGA 1482 0.4332 MSTQNRRPSFSSSTTSSLAKRHASSSENPGKAMAAPPPHLAKKRAPLTNLTNQKNASHCALRKSLPPSNLVPYTTKITHTKKKFPACNSSSATSGKKGLTSSNAKSTPVVAPKATSFPQRDQSATATAALPCSMDISPIKSDRMSVSLDETMSTCDSFKSHEIEYIDNSDVSALDFIDRKTFSNLNISDKTEAPANICSRDMLVGLERDGKFVNIDDNYLDPQLCAPYACDIYKHLRASEAKKRPSTDFMERIQKDINPNMRAILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMSRQKLQLLGVACMMIAAKYEEICAPQVEEYCYITDNTYFKEEVLQMESAVLNYLKFEMTAPTIKCFLRRFVRAAQGVNEVALLQLECLTNYIAELSLLEYTMLCYAPSLIAASAIFLAKLILFPSEKPWNSTLQHYTLYNASDLRNCVKDLHLLCYNSHSSSLPAIREKYSQHKYKYVATKSCPPSIPRELFQS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0310 493 FunFam Mitotic cyclin 6 245 345 - -
Mibi05g0310 493 Gene3D - 231 479 - -
Mibi05g0310 493 CDD CYCLIN 358 451 IPR013763 -
Mibi05g0310 493 FunFam Cyclin A1 347 479 - -
Mibi05g0310 493 Pfam Cyclin, C-terminal domain 360 481 IPR004367 -
Mibi05g0310 493 Gene3D - 245 358 - -
Mibi05g0310 493 SMART Cyclin_C_2 360 483 IPR004367 -
Mibi05g0310 493 MobiDBLite consensus disorder prediction 1 24 - -
Mibi05g0310 493 ProSitePatterns Cyclins signature. 262 293 IPR006671 -
Mibi05g0310 493 MobiDBLite consensus disorder prediction 1 46 - -
Mibi05g0310 493 PIRSF Cyclin_A_B_D_E 1 490 IPR039361 -
Mibi05g0310 493 PANTHER CYCLINS 162 471 IPR039361 -
Mibi05g0310 493 MobiDBLite consensus disorder prediction 85 122 - -
Mibi05g0310 493 Pfam Cyclin, N-terminal domain 231 357 IPR006671 -
Mibi05g0310 493 SUPERFAMILY Cyclin-like 360 485 IPR036915 -
Mibi05g0310 493 SMART cyclin_7 267 351 IPR013763 -
Mibi05g0310 493 SMART cyclin_7 364 452 IPR013763 -
Mibi05g0310 493 SUPERFAMILY Cyclin-like 221 357 IPR036915 -
Mibi05g0310 493 CDD CYCLIN 261 350 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0310 Mibi-ChrMibi05 3064336 3067618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0310 4 491 Core Cell Cycle Gene Families AT1G44110 62.933 0.0 571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0310 05 3064336 3067618 Mibi05g0310 05 3064336 3067618 ECH