Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0296 ATGGACTCGTGTAAGAGAATGGTAATGGCAGATGATGCCACACACGTGTCTGGTATCATGCAGCATTGTTCAGAGTTTCCATTGCAATCTGTTCCATTGGAGTCTAACATTGAGCTTTCAAATATTCTGGATGGTTATAAATATTTCTCTACAAGTGAAGAATCTGGTTCTGCAAACTGTATTAATGTTACAGACGTGCCCAGCAATGCTACAGCAAGTGAATGTGAAGAAGATGCTGATAGCAAGTGTTCAGACATTGTGTTATTGCCTCATCGAAGGAACAGTCGACAAAACAAATCTGTTTGTAAGCGACAGACTGGAAGTGCTCCAAGAAAATGCAATAAACAAGCCATTGTGCCCCAGCAGGATGTGAAGAAAATCTCAAAGGCATCTAGAAAGAAAAGAAGCTGTTTCTCCAGATCAGCTCGCTCTTCTGTCTGGGGATTGCTAGGGAACATCAAACAGGCTGTTGGAACGGATAAAGAATTAAACATAAATAAATTTATGTTTGAAGGATTGGGAAAGGCCAGGGGCAGCTGTCAAAGTGGAAAAACAAATAAGGATAGTGAAAATTCTAGCATATTCAATTCAATATCTGGTGCTTCAACCACTGGTATGCGTCTGAAGATCAAAGTGGGGAATGAAAACTTGTATTACCCTTACTTGTTGAATCCAGAATCTGTTTATGGCTTGACTTCTGCTTCCAACTTGGGACCTGGTTCAGGTTCTCAAAATTTTGCTACTCGCATTGGAGACAAGTTCTTTGAAGAGGTGGCTATGGGAAAGCTTGAATCTGATGAAAATTACCATTACAAGCATGCAGCTGTTCTGAGTGGGCAAACCAAAAACTTAGAAAGTGCTGCACCAATGGAGAAGTCAGATGGCAAGACAGAGGAGTCTTGTCTTGTGGCTCCTTCAAAAAAGTTGGCTGATGCATTGATCGAGCCTGTCAATATTGAAAGTTTGGATCCTGGAACTGGAACTTCACCTGACTCAGGAGTGATTGATTCAATTCCTAAAGTCCTGGTGGGAGAAAGGCATCAGGAAGATCTGAATAATACTGATTTTGGTTCTTCTAAGGAGTTTATTTTTTCTGTTCATGATACTGCTAGCAAAAGTAGGAAAAAGAAAGATAAACTTGCTTGTTCACGTGATAGAAGTGTAAGAGATGTATCACCAGGTTCCCCTGGGAAAAATAAAGCAAATCACTCAGAGAAACTTGGAGGTAAGAAGAAATGCACTAGTGGAGTTCATACAAAACCATTGCACCTCTATGGAAATATTGGACTCAGAGATCCATCTGATGCTTGGGAAGTGAAAAGTGGTGCGGAGGTTAAGGCACAGTGCAGCATAGATGTTGACAGCGAATATTTGGACTCCTTTGATTCTGAGAAATTTCTGCCTCCTGAGAGACAATTGGGTTATAAATTTTTCAAAGGTCTTGAATCTCATAATGTCAGCAAGACCAAGACTAAAGCTTCTAAGTCAGAGAGAAGGAAAAAGACTGCTTGGAAACATAGGGAGAAACAGGGGATATCTATCACCAAGTGTGGTATTAAAGGAAAAAGCGTCCCTGATAAAGTTATATGTGAAACAGAAGATTATCTGTGTGAAGAAAATGATGCTGAAGAGAAACAGAAGTTGGGTTTCGGTGGAAAAATTAATGCTGATGAGAACAAAGTACCAGCCAGTCTGGACATGGTACCTGGTGTTGGTTCAGGGGAGCAGCATCCGTCACCACGAAAGGCATGGGTGTGTTGTGATGATTGCCACAAGTGGCGGCTTTCTCAGGAGTCAACTTTTACTCATATTTCTGCCAATAAGTTTCTGCATCGTAGCCGCAAAACTCAGACTATAGATGAGATAATGGTTTGCCATTGCACACCACCTCTAAAAGGTCAGTTGGGATGTGGAGATGCATGTCTAAACCGGATGCTTAACATTGAGTGTGTTCAAGGGGGCTGCCCATGCGGGGATCTCTGTTCAAATCAGCAGAAACGCAATTATGCCAAACTGAAGTGGTTTAAATGTGGGAAAAAGGGCTATGGGCTAAAGGCGACTGAGGACATATCTGAAGGGCAATTCCTTATTGAATATGTTGGCGAGGTGCTTGATGTGCATGCTTACTGGGCTAGACAAAGAGAATATGGTTTGAAGGGTCATAGACATTTCTACTTCATGACCTTGAATGGCAGTGAGGTGATTGATGCAAGTGCAAAAGGAAACCTGGGGCGTTTTGTTAATCATAGTTGTGATCCTAACTGTAGAACAGAAAAGGTGAATACATTAGCTGCAGAAAATGTGGTGTTTTCACTGGAAACCGCTCTTAAGAAAAAATTTATATTGTTTCATTTGTACGTGCTTTTTTCAATTGTTGTTAACATTAACTTTGAACTTTTTTCTGTATACCTTCCCCAGGATGAAGAGGTGACATTTGACTACAACTATGTTAGGGGTTTTGGCGCTGCTGCGAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGTTATATAGGTGGTGATTCACTCAATGCTGAAATCATTATTCAAGATGATTCGGATGAAGAATTTCCAGAACCTGTGATGCTTGCTGAAGGTGATATTGAAGACGGGCCAGGTGTTTACCCAGATAAGGAGAATTCTCTAAACCCTGCCTCTGCTAGCTCTCAGCTGCACAGCTTGATAGATGTGGAAAATTCTAAGGGCAATTTATCATCTTCCATTCCAGTGAAGGTACTTTCCCAGCAAATGGAGGATGTAACAAGCAAACGTATGCCTGTCTTACAACAAGGATATGCAGTAGAATCTGAGCTTTCTGACAAAATTTTGATTCCAAATATGGAGATTTCTTCCTCTTCAACTGTTAGCAAATCCAAATCTGAAGTAATTGAAGATAAATGTGGTCTTTCAAAACCTCATCTTCTTGTGAAGGCTTCTCAAATAAATGGTTTTGTTAAAAAGGGGAAGGTGTGTGCTAACCATACAAATAATCTCAAAGTTAGAGTGACCACCAACAGATTGCAGGTTCCATCCATCAAACATAAAAAAGCAGTGGAAGGTTCTTCCAATGGCCGTTTTGAAACAGTTGAGGAGAAGCTTAAGGAGTTGCTAGATCCAGATGGAGGAATTAGCAGAAGTAAAGATGCCACCAAAGGCTACTTGAAGCTTTTGCTTCTTACTGTGGCATCAGCCCTTTTGGAAACAAAATCAAGAGCTGTGATGAATGATATTATTCAAAAAAATGGTTTACGCATGCTACACAACATAATGAAGCAATACAGGCGGGACTTTAAAAAAATTCCAATTCTGAGAAAGCTTCTCAAGCCATCTAGCCATTTTGATGGGCCTTCATTGTTAACTTATGTGAGAATGGGTAAGAAGCAGAGCTTTAGAGAATCTATGCTGTCCTTAACGGAACATGAAGACAAAGAGGTCCATCGAATTGCTCGAAGCTTCCGAGACAGATGGATTTTTAGATCTGTCAGAAAACGTGGTATTATAAACAGGGGTGACTGTGGGAAATCTTATAGGAGTTTCAAACATAATAGATTTTCAGCATCACTGAACTCTGCTTGCGAACGAAGTTTGAGACCTACTAAAGCAATAGATTGTGCTCAGGTGCCATCGGTTAAAACAAGTTCAGCCAATTCTGTCGTCCAGGAGGTCTGCTCTGCACCATCTCTGAATGGGTGTGAAATCAGGGGGCAAACGAGACGTAAACGCAAAAGTCGATGGGATCAACCAGCAGAAACAAATTCAGTTGTAGTAACAAGTTCAGCCAATTCTGTCGTCCAGGAGGGCTGCTCTGCAACATCTCTGAATGGGTGTGAAATCAGGGGGCAAATGAGACGTAAGCGCAAAAGTCGATGGGATCAACCAGCAGACACAAATTCAGTTGTAGTATCTTCCGAGTACAAGAAAGGAAAAGTTGTCTCTGGGCAGTCAAAGCAAGGTGACGTGATTATTAATGCTGTTAATGTTGGACATAGTATTTCTGAAGATGTTCCACCTGGGTTTTCATGTTTATTCCAACCTATGGATTCTTCAAATGCCTCCCAGAATTCTGGTGATCTTGCTCCGCAACATCCGGGCCATTCTGGTTCTGGAGGCCTCGCTGATGCAGTTATAGGTTATCCAAGGGAAAAATTTAATTCTCGCTTGCCTGTCTCATACGGAGTTCCATGGCCTATTATCCAACAACATGGGACGCCTCACGTGGAAAATGTTGGCAGTTGGGCCACTGCACCAGCCATACCTTTCTATCCGTTTCCTGCACCGCCCCCATATCCTCCCCAGAATGACTGTCAATCTTCCAGGTCTACTGATGCTATGAAAATAGATCGTCCTGCAGAAGTTGTGAAGCGTGATTCTAGTCGCCTAGTTAATTGTTACTGGGATGGTATGGCTCCCAGCACAACTGGTCTTGATGCTAAAGACCTTTCATATGAGGATAATAACCACATTTCTGAACCATTGAAGGGTTCCCCTAATGATTTGGGTAGGAGTTACTTTAGGCAACAAAAAATGGAATATATGAAAAATACATCGACCATGGTCCAGGAGGAAATCCTCGGAATATAG 4581 0.4158 MDSCKRMVMADDATHVSGIMQHCSEFPLQSVPLESNIELSNILDGYKYFSTSEESGSANCINVTDVPSNATASECEEDADSKCSDIVLLPHRRNSRQNKSVCKRQTGSAPRKCNKQAIVPQQDVKKISKASRKKRSCFSRSARSSVWGLLGNIKQAVGTDKELNINKFMFEGLGKARGSCQSGKTNKDSENSSIFNSISGASTTGMRLKIKVGNENLYYPYLLNPESVYGLTSASNLGPGSGSQNFATRIGDKFFEEVAMGKLESDENYHYKHAAVLSGQTKNLESAAPMEKSDGKTEESCLVAPSKKLADALIEPVNIESLDPGTGTSPDSGVIDSIPKVLVGERHQEDLNNTDFGSSKEFIFSVHDTASKSRKKKDKLACSRDRSVRDVSPGSPGKNKANHSEKLGGKKKCTSGVHTKPLHLYGNIGLRDPSDAWEVKSGAEVKAQCSIDVDSEYLDSFDSEKFLPPERQLGYKFFKGLESHNVSKTKTKASKSERRKKTAWKHREKQGISITKCGIKGKSVPDKVICETEDYLCEENDAEEKQKLGFGGKINADENKVPASLDMVPGVGSGEQHPSPRKAWVCCDDCHKWRLSQESTFTHISANKFLHRSRKTQTIDEIMVCHCTPPLKGQLGCGDACLNRMLNIECVQGGCPCGDLCSNQQKRNYAKLKWFKCGKKGYGLKATEDISEGQFLIEYVGEVLDVHAYWARQREYGLKGHRHFYFMTLNGSEVIDASAKGNLGRFVNHSCDPNCRTEKVNTLAAENVVFSLETALKKKFILFHLYVLFSIVVNINFELFSVYLPQDEEVTFDYNYVRGFGAAAKKCYCGSPHCRGYIGGDSLNAEIIIQDDSDEEFPEPVMLAEGDIEDGPGVYPDKENSLNPASASSQLHSLIDVENSKGNLSSSIPVKVLSQQMEDVTSKRMPVLQQGYAVESELSDKILIPNMEISSSSTVSKSKSEVIEDKCGLSKPHLLVKASQINGFVKKGKVCANHTNNLKVRVTTNRLQVPSIKHKKAVEGSSNGRFETVEEKLKELLDPDGGISRSKDATKGYLKLLLLTVASALLETKSRAVMNDIIQKNGLRMLHNIMKQYRRDFKKIPILRKLLKPSSHFDGPSLLTYVRMGKKQSFRESMLSLTEHEDKEVHRIARSFRDRWIFRSVRKRGIINRGDCGKSYRSFKHNRFSASLNSACERSLRPTKAIDCAQVPSVKTSSANSVVQEVCSAPSLNGCEIRGQTRRKRKSRWDQPAETNSVVVTSSANSVVQEGCSATSLNGCEIRGQMRRKRKSRWDQPADTNSVVVSSEYKKGKVVSGQSKQGDVIINAVNVGHSISEDVPPGFSCLFQPMDSSNASQNSGDLAPQHPGHSGSGGLADAVIGYPREKFNSRLPVSYGVPWPIIQQHGTPHVENVGSWATAPAIPFYPFPAPPPYPPQNDCQSSRSTDAMKIDRPAEVVKRDSSRLVNCYWDGMAPSTTGLDAKDLSYEDNNHISEPLKGSPNDLGRSYFRQQKMEYMKNTSTMVQEEILGI 1526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0296 1526 Gene3D SET domain 585 853 IPR046341 -
Mibi05g0296 1526 Pfam AWS domain 634 665 IPR006560 GO:0005634|GO:0018024
Mibi05g0296 1526 MobiDBLite consensus disorder prediction 1345 1370 - -
Mibi05g0296 1526 PANTHER SET DOMAIN PROTEINS 120 1251 - -
Mibi05g0296 1526 ProSiteProfiles SET domain profile. 670 815 IPR001214 GO:0005515
Mibi05g0296 1526 ProSiteProfiles Post-SET domain profile. 823 839 IPR003616 -
Mibi05g0296 1526 SMART shorttest3 620 669 IPR006560 GO:0005634|GO:0018024
Mibi05g0296 1526 MobiDBLite consensus disorder prediction 1345 1361 - -
Mibi05g0296 1526 SUPERFAMILY SET domain 596 760 IPR046341 -
Mibi05g0296 1526 MobiDBLite consensus disorder prediction 375 413 - -
Mibi05g0296 1526 Pfam SET domain 681 770 IPR001214 GO:0005515
Mibi05g0296 1526 SMART set_7 670 821 IPR001214 GO:0005515
Mibi05g0296 1526 ProSiteProfiles AWS domain profile. 620 670 IPR006560 GO:0005634|GO:0018024
Mibi05g0296 1526 SMART PostSET_3 823 839 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0296 Mibi-ChrMibi05 2918634 2928770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0296 655 838 C2H2 Transcription Factor Family AT2G23740 30.653 7.92e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi05g0296 SET 1e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0296 05 2918634 2928770 Mibi05g0296 05 2918634 2928770 ECH