Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0295 ATGGGAGAGGCCGGAGAAGTCCAAGGCGGAAGCTCCGGTGGCCGGACGGTGGTCGTAGGAATGAAGTTGGACTCGGCTAGTAAGGAGCTTCTCACTTGGGCTTTGGTCAAAGTTGCTCAGCCCGGTGATGTTGTGGTTGCTCTTAATGTTCTTGACAACAATCAAATCGTTGATCGAGATGGGAAATTGTCCCTTCTTTCGCTTGTCAACGCATTTGACTCTGTTCTTGCTGTTTACGAAGGTTTTTGCAATTTAAAACAGGTGGATCTCAAGCTCAAAGTTTGCAGAGGCCCATCAGTCAGGAAAATTTTAATCCGAGAAGCAAATGCTTATTCTGCAACTCATCTTATAGTAGGAACAGCACATGCCCTCCATGCAATTCGCCCATCTAGCTCGGTAGCTAAGTACTGTGCAAAAAAGTTATCCAGAAATTGCTGTGTTCTGGCTGTTAATAATGGGAAAATTGTGTACAAGAGAGATGGCTCCCTGCCAGTTCCTTCTCACTCAAAAGGAATTGATCGCCAGAACAAAATTGGTGTGCCAGGAACCGTTCACCGGACATTCAATAAGAGTTCTAAAGTGCTAAATGATGACAATACAGAAGAAGATAAGCGTGGTAATGTTTTTCTGGGGTCTAAAGAATCTGTGATTCAGAAACCAAGCTGCTCAATATGTGGCTCAATTTTAGCACTGCCAAACATGTCCTGCGATCAATCTGCAGAGAAGCCTTCAGGGGATGATGGTAACAAGGGACATTCTTTAGCTATAGTGCCTGTACAGAAAACTAAGGTGGCATCACGTACATCAATAACAACCTTGTCTGACAGAGAACTACCTAAGGAGAAACCTGGTTGGCCACTGTTACAACGGACAGTTATATCAGAAAGAGAGTCCCATGATGTATCATCCACGTGCCAGATATCTGTGGTCCAGTGGGCAATGCAGTTACCCAGTAGAAATCTTTCATATGATCGTAAAGAAACTATAGCTTTAGATGGCAGAAGCGGTGCTATTGTTCCAGTTGATGTTGCAGTAAGGACTGATTCTTCTTCACCAGATAACAATTCAAAAAGTACTCCTAAAGAATTGGAGGGTCTTCATGAGAAGTACTCATCCTCGTGCAGATTGTTTCAGTACCAGGAACTTGTACGGGCAACTTCAAATTTCTCGCGAGAAAATCTGATTGGAAAAGGAGGAAGTAGTCAGGTTTATAGAGGCTGCCTTCCTGATGGCAAGGAGCTTGCCGTCAAGATTTTAAAGCATTCAAATGATGTTTTGAAAGAGTTTCTATTGGAAATAGAAATTATCACTACCTTGCACCATAAAAACATTATTTCCCTCCTGGGTTTCTGCTTTGAGGGTGGCAATCTTCTTTTGGTCTATGATTTTTTGACTAGAGGAAGCCTTGAAGACAATCTCTATGGGAATAAAAAAAATCCACTTGTCCTTGGCTGGACTGAGAGATATAAGGTGGCAATGGGTGTTGCTGAGGCACTGGACTATCTGCACAACAATGGTGCTCAATCTGTGATCCACAGGGATGTGAAGTCATCAAATATATTATTATCCGACGACTTTGAGCCTCAGCTCTCTGATTTTGGTCTTGCTAAATGGGCTTCCACCTCATCTTCCCATGTAGCTTGCACTGTTGTTGCTGGAACTTTCGGTTACTTGGCTCCAGAGTACTTCATGTATGGCAAAGTCAATGCCAAGATAGATGTCTACGCATTTGGTGTGGTACTTCTGGAACTTCTTTCTGGAAGAAAACCCATAGGTGGTGACTACCCCAAAGGTCAAGAGAGCCTCGTTATGTGGGCAAGTCCAATTCTCAATAATGGGAAGGTGTCACAATTGTTAGACCCAAGCTTGAGCGATAACTATGATTATGCACAGATAGAGAGAATGGCATTGGCAGCCAAACTTTGTATAAGACGTGATCCAAGAGCCAGGCCTCCAATGAGCCTTATTTCAAAGCTTCTTGAAGGGGATATTGATGCGATCAAGTGGGCAAGGTTGGAGGTTAATGCTTCAGAGAAACCTGGAATGCTTGACGATGAAGAATGGCCGCCTTCAAATTTACAGTCACATCTCAATGTTGCACTGCTTGACGTGGAGGATGACTCATCCATGAGCAGTGTTGAGCATAATGTATCATTGGAGGACTATTTAAGAGGACGATGGAGCCGCTCTTCCAGCTTTGACTGA 2205 0.4358 MGEAGEVQGGSSGGRTVVVGMKLDSASKELLTWALVKVAQPGDVVVALNVLDNNQIVDRDGKLSLLSLVNAFDSVLAVYEGFCNLKQVDLKLKVCRGPSVRKILIREANAYSATHLIVGTAHALHAIRPSSSVAKYCAKKLSRNCCVLAVNNGKIVYKRDGSLPVPSHSKGIDRQNKIGVPGTVHRTFNKSSKVLNDDNTEEDKRGNVFLGSKESVIQKPSCSICGSILALPNMSCDQSAEKPSGDDGNKGHSLAIVPVQKTKVASRTSITTLSDRELPKEKPGWPLLQRTVISERESHDVSSTCQISVVQWAMQLPSRNLSYDRKETIALDGRSGAIVPVDVAVRTDSSSPDNNSKSTPKELEGLHEKYSSSCRLFQYQELVRATSNFSRENLIGKGGSSQVYRGCLPDGKELAVKILKHSNDVLKEFLLEIEIITTLHHKNIISLLGFCFEGGNLLLVYDFLTRGSLEDNLYGNKKNPLVLGWTERYKVAMGVAEALDYLHNNGAQSVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSSSHVACTVVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVLLELLSGRKPIGGDYPKGQESLVMWASPILNNGKVSQLLDPSLSDNYDYAQIERMALAAKLCIRRDPRARPPMSLISKLLEGDIDAIKWARLEVNASEKPGMLDDEEWPPSNLQSHLNVALLDVEDDSSMSSVEHNVSLEDYLRGRWSRSSSFD 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0295 734 Pfam Protein kinase domain 390 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0295 734 SUPERFAMILY Protein kinase-like (PK-like) 370 660 IPR011009 -
Mibi05g0295 734 CDD USP_Like 16 150 - -
Mibi05g0295 734 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 150 - -
Mibi05g0295 734 Gene3D HUPs 14 153 IPR014729 -
Mibi05g0295 734 PANTHER OS08G0249100 PROTEIN 223 700 - -
Mibi05g0295 734 Pfam Universal stress protein family 15 143 IPR006016 -
Mibi05g0295 734 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 14 151 - -
Mibi05g0295 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Mibi05g0295 734 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 358 463 - -
Mibi05g0295 734 ProSiteProfiles Protein kinase domain profile. 389 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0295 734 Gene3D Transferase(Phosphotransferase) domain 1 464 673 - -
Mibi05g0295 734 SMART serkin_6 389 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0295 734 MobiDBLite consensus disorder prediction 345 364 - -
Mibi05g0295 734 ProSitePatterns Protein kinases ATP-binding region signature. 395 417 IPR017441 GO:0005524
Mibi05g0295 734 Gene3D Phosphorylase Kinase; domain 1 350 463 - -
Mibi05g0295 734 FunFam Putative receptor-like serine/threonine-protein kinase 464 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0295 Mibi-ChrMibi05 2910988 2914059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0295 346 659 Trihelix Transcription Factor Family AT1G68690 42.947 1.27e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi05g0295 Pkinase 2.9e-43 CL0016