Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0280 ATGGCATCGTCGTCGAATTCACCGTGTGCGGCATGCAAGTTCCTGAGGCGGAAGTGCCAGCCGGAGTGCGTGTTCGCGCCATATTTCCCGCCAGATCAGCCACAAAAGTTCGCGAACGTGCACAAAGTATTTGGAGCGAGCAATGTGACGAAGCTGTTGAACGAGCTACACCCTCACCAGAGAGAAGACGCGGTCAACTCCCTCGCCTACGAGGCCGACATGCGCCTACGTGACCCCGTCTACGGCTGCGTCGGAGTCATCTCCCTCCTCCAACACCAGCTCCGCCAGCTGCAGATGGACCTCACATGTGCCAAATCTGAGCTCTCCAGGTACCAAACCCTAGGCATCACGGGCCACGGCCTCATCCACCAGGCCCAAAACATCGGCATGGGCCTCATCGGCGACCACCACTACCACCACCACCACCAGTTCTTCCCCCGGGACCACCACCAGTCTCCTATGATAAGGAGCTTTGACGCGGCTAATAACTATGATGCTACCCATGCTCATGGTGGCCTTCTTTCCATGAATGTCTCCGCTAGCATCACCCAGTTTCAGCATCAGCACCCTAGGGCTGCCGCCGCCGATGATCGTCGTACCACTATTGATCCCTCTTAG 618 0.5761 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGITGHGLIHQAQNIGMGLIGDHHYHHHHQFFPRDHHQSPMIRSFDAANNYDATHAHGGLLSMNVSASITQFQHQHPRAAAADDRRTTIDPS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0280 205 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Mibi05g0280 205 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Mibi05g0280 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 157 - -
Mibi05g0280 205 Coils Coil 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0280 Mibi-ChrMibi05 2783997 2784614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0280 2 205 AS2 family AT1G65620 69.484 1.86e-87 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi05g0280 LOB 2.8e-43 No_clan