Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0279 ATGAAGAAGGCCATCAAAATCTGTTGGCGGTGGATGGTGAGTGCAATATTAGCAGTTATGGCAGTTGCAACCGCCCAATCCCTGCCCGGCTGCCCCAAAAAATGTGGTCAAGTTGAGATTCCATATCCATTTGGGGTAGGCCTTCAATCTGGTACCGGTAACAACTGTTTCTTCAATGAGGCATTTCATGTGAATTGTACAAACTCCACCCCATTTCACGGCAACGCCGAAATCTCAAGCATATCCCTCCAAGGTCAAATAGATATGTCCATGCCAATTTCCAAGGTTTGTTTCAATGATACAGGAGGAGAAATAGACGACATCAAAGTCTTCCTATCGACCCCTGTTTTCACCATTTCCAGCACTGAAAACAAGTTCGTAAGCGTTGGCTGTGACACTTACGGCTACCTAAATAGTTTCCAGAACAGCCACACATATTCTACGGGATGTTTGACACGATGTAACGGAGTTCCCAATCAACAGGATCATGGAACTTGTTCTGGGATTGGGTGTTGCCAGGTGGATATTCCTCTGGGAATGAGGAATATTAGTATTGAAGCGTATAGTTTTAATTTGGAAAGGAAGGCGTCAGATTTCAATAACTGTAGCTATGCTTTTGTGGCCAAGGATGGTTGGTTTAATTTCTCTACGGCCGATCTCAGGAACTTACCGTTTGATTATGCACTGGTGGTGGTGGATTGGGCTATTTCCAATGGCACGTGTGAAAGTGAGAGGACATCACTGGATTATGCCTGCAAATCCAACACACACTGTGAAAACTCGGGTTATGGATTCGGGTACCGGTGCATATGCAAACCTGGTTTTGAAGGCAACCCGTATCTTCCCCAGGGTTGTCAAGATGTAGACGAGTGTAAGGAATTGACCCATGATTGCACAAGTGAACATCACTGTCGTAACACTTTTGGGTCTTATGAATGTTTTTGCCCTCACGGATACTCTGGGAATGGAACCAAGGAATCAGGATGCCACCCGCCATGGCGTCGCAATCCACTTACAATACTTCTCATCGTTGCAAGCGTTGGATTGGTTGTTCTGTTTGTGAGTGTGGCCTGGCTATATTTGGTATACCAGAAGAGGAAGCTGATGAAGGAGAAGGACAAATTCTTTCGACAAAATGGGGGTGCTGTTTTGCAACAAAAGCTCTCATCTGTGAAAGAAGGATCCTCCCTCACGGCCAAAATATTTACCGCTCAAGACTTGAAAAGGGCTACCAACAACTTCCATGACAGCCTAGTAATTGGCCGAGGTGGTTTTGGCACTGTTTACAAAGGAATCCTCCCAGACAACACCATCGTCGCAATCAAGAAATCAAAACTGGTGGATGAAAGCCAGATTGAACAATTCATAAATGAAGTGATCATACTCTCCCAGATAAATCACAGGAATGTGGTCAAACTCCTAGGTTGTTGTCTAGAAACAGAGGTTCCTTTATTAGTCTATGAGTTTGTTAGTAACGGCACCCTCTACGAATCCATACACAACAAAAGCAAAGCTTGTGTCTTTACTTGGGAAATCCGTCTGAGGATAGCAACAGAAGTAGCTGGAGCACTTTCCTATTTACACTCTGCAGCCTCCGTACCCATAATCCACAGAGACATCAAGTCCTCTAACATCCTTCTGGATGAGACTTGCACAGCCAAAGTCTCTGATTTTGGAGCTTCCAGGTTAATCCCACTTGATCAAGCAGAACTAGCCACAATGGTACAGGGTACTTTCGGGTATTTGGACCCAGAATACATGCAAACGAATCAACTCACAGAGAAGAGCGATGTGTACAGTTTTGGGGTTGTGATTCTGGAACTCCTAACAGGAAGAAAGGCTCTCTCATTTGATGGACCAGAAGAGGAAAGAAACCTTGCAATGCACTTCCTATCATCCTTGAACGAAGGTCGATTGTTTGAAGTGGTTGAAAGAGGGATGGTGAATGATGGAAATAAGAAGACTCTGAACGAAGTGGCTGAGCTTGCAGCGAGGTGCTTGAGGCTTAAAGGAGAGGAGAGGCCAAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGAATAAGGATGATGGAGAAACATCCATGGATCAACAAAGTCTTCAAGGAAGAGGAATCACACTTATTACTTCCTCAGACGCCTTGTTTTCCTGAATCAGTTGATAGTGTTGTCTATAAACATACTGCGTGGGGTAGCATTGTTGATGGTGTGGTCATTGATTTAGATGATGGAAGATGA 2235 0.4452 MKKAIKICWRWMVSAILAVMAVATAQSLPGCPKKCGQVEIPYPFGVGLQSGTGNNCFFNEAFHVNCTNSTPFHGNAEISSISLQGQIDMSMPISKVCFNDTGGEIDDIKVFLSTPVFTISSTENKFVSVGCDTYGYLNSFQNSHTYSTGCLTRCNGVPNQQDHGTCSGIGCCQVDIPLGMRNISIEAYSFNLERKASDFNNCSYAFVAKDGWFNFSTADLRNLPFDYALVVVDWAISNGTCESERTSLDYACKSNTHCENSGYGFGYRCICKPGFEGNPYLPQGCQDVDECKELTHDCTSEHHCRNTFGSYECFCPHGYSGNGTKESGCHPPWRRNPLTILLIVASVGLVVLFVSVAWLYLVYQKRKLMKEKDKFFRQNGGAVLQQKLSSVKEGSSLTAKIFTAQDLKRATNNFHDSLVIGRGGFGTVYKGILPDNTIVAIKKSKLVDESQIEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLYESIHNKSKACVFTWEIRLRIATEVAGALSYLHSAASVPIIHRDIKSSNILLDETCTAKVSDFGASRLIPLDQAELATMVQGTFGYLDPEYMQTNQLTEKSDVYSFGVVILELLTGRKALSFDGPEEERNLAMHFLSSLNEGRLFEVVERGMVNDGNKKTLNEVAELAARCLRLKGEERPSMKEVAMELEGIRMMEKHPWINKVFKEEESHLLLPQTPCFPESVDSVVYKHTAWGSIVDGVVIDLDDGR 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0279 744 Pfam Protein kinase domain 415 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0279 744 FunFam Wall-associated receptor kinase 2 383 489 - -
Mibi05g0279 744 SMART egfca_6 287 330 IPR001881 GO:0005509
Mibi05g0279 744 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Mibi05g0279 744 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 691 IPR045274 GO:0007166
Mibi05g0279 744 ProSitePatterns Calcium-binding EGF-like domain signature. 287 313 IPR018097 GO:0005509
Mibi05g0279 744 Gene3D Laminin 239 289 - -
Mibi05g0279 744 FunFam Wall-associated receptor kinase 2 490 707 - -
Mibi05g0279 744 SMART egf_5 290 330 IPR000742 -
Mibi05g0279 744 SMART egf_5 240 286 IPR000742 -
Mibi05g0279 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Mibi05g0279 744 Gene3D Laminin 290 329 - -
Mibi05g0279 744 ProSiteProfiles Protein kinase domain profile. 414 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0279 744 FunFam Fibrillin 2 282 327 - -
Mibi05g0279 744 SUPERFAMILY Protein kinase-like (PK-like) 398 721 IPR011009 -
Mibi05g0279 744 CDD EGF_CA 287 321 - -
Mibi05g0279 744 Gene3D Transferase(Phosphotransferase) domain 1 490 705 - -
Mibi05g0279 744 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 304 315 IPR000152 -
Mibi05g0279 744 Pfam Wall-associated kinase 165 272 IPR013695 GO:0004674|GO:0016020
Mibi05g0279 744 Pfam Wall-associated receptor kinase galacturonan-binding 31 86 IPR025287 GO:0030247
Mibi05g0279 744 Gene3D Phosphorylase Kinase; domain 1 378 489 - -
Mibi05g0279 744 SUPERFAMILY EGF/Laminin 286 324 - -
Mibi05g0279 744 SMART serkin_6 414 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0279 744 CDD STKc_IRAK 420 687 - -
Mibi05g0279 744 ProSiteProfiles EGF-like domain profile. 287 330 IPR000742 -
Mibi05g0279 744 Pfam Calcium-binding EGF domain 287 329 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0279 Mibi-ChrMibi05 2777642 2780107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0279 17 744 Receptor kinase-like Gene Family AT1G21230 45.222 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mibi05g0279 Pkinase 2.2e-50 CL0016