Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0271 ATGACTAAGATCAGCCCTGGGCCCCGCAAGTGCAAGGCCGGCAGACTAGAGTTTGCAAGACTAGGAAGGGGAAAGGGAAGTCCTCTCAGAAAAAGTCAGGAACCCCCAAATCGGCTCGTCTCTTTTCTAGTATCTCTCGTCGACATCCCGATCTCTTGTGATTCTGATACTTCTCCAATTGGATCCTCTTCTTATTTTACGGAACTCAGAACACGTCATAGGAGCAGAGACATGGCTAATAATGCAGCAGCCTGTGCAGAGAGGGCAACCAGTGACATGCTGATTGGCCCGGACTGGGCGATTAACATAGAGTTGTGTGATATAATTAATATGGACCCCAGGCAAGCAAAGGATGCATTAAAGATACTCAAGAAGCGTTTGGGCAGTAAAAATCCGAAAATACAACTTCTGGCTCTTTTTGCATTGGAGACTCTCAGCAAAAATTGTGGTGAAAATTTGTTTCAGCAGATCATTGAGCGGGATATCTTACAGGAAATGGTGAAGATAGTGAAGAAGAAGCCTGACTTAAATGTCAGGGAAAAGATACTGATATTGATTGATATGTGGCAAGAAGCTTTTGGCGGTCCAAGTGGAAGGTTTCCCCAGTTCTATGCAGCATATAATGAACTAAGGTCTGCGGGAGTTGAATTTCCTCCACGGGAAGAGAATAGGGCACCACTGTTCACTCCACCTCAAACCCAGCCAATTGATTTTCCTACTGCAGAATATGATGATGCTGCAATTCAAGCTTCACTTCAGTCGGATGCTGCTGGCCTTAGCCTGCCAGAGATTCAAAATGCTCAAGGACTAGCTGATGTATTGATGGAAATGCTTAGTGCTCTGGATCCGAAAAATCCTGAGGCTTTGAAGGAAGAAGTAATTGTGGACCTTGTTGATCAATGTCGTTCTTACCAGACGCGGGTTATGCATCTTGTGAACAATACTGCGGATGAGCAACTTTTGAGTCAGGGATTGACACTGAATGACAGCCTACAACGTGTACTTAGCCGACATGATGATATCCAGAAAGGAACTATTAAGCCAGGCACAACTGCAGGAGGAGCAGAGACCTCTGTTCTTCCACTCGTCAATGTAAGCCATGAGGATGATGAGTTGGAAGATGACTTTGATCAGTTAGCTCATAGGTCAAGAGATGCTCAGGCACTGGGTCGTAAACCAGCCTATGACAAGGCCGAAAGTGTCCGAGTAAATCAAATTCTTCCCCCACCACCGCCAAGAAAGCCTGTTGCCTCTGATTCTAGCATGATTGACTATCTTAGTGGTGACGCATATAAAGTAGACAACTCACAACCAACCCCATTTCCGGTTCCGTCTCATTCTAGCCCTCATCCTTCCTCACCCCCTTCTCATGGAATGAGTACATCACCACCAACATTTACCAGCCAACCCGTGTATGATGAACCGAGCAAATCTGCCGATCAACTTCCTCCAGCTCCATGGGACACTCAATCTACTACTGTACTTCCACCCCCACCGTCGAGGTATAACCAGAGACAACAGTTTTTTGAGCAGCAAGGGACATCTCATTCAAGTAGTGGATCCAACTCCTCTTATGATAGCTTGGTGGGACAAACGCAGAATTTGTCTTTGAATTCATCTACCCCAACTAAACCAGAGAAGCCAGAAGATGCCCTTTTCAAAGATCTGGTTGACTTTGCTAAATCAAAGACTTCTTCGTCCTCGAAACCAAATAGGTCGTATTGA 1725 0.4557 MTKISPGPRKCKAGRLEFARLGRGKGSPLRKSQEPPNRLVSFLVSLVDIPISCDSDTSPIGSSSYFTELRTRHRSRDMANNAAACAERATSDMLIGPDWAINIELCDIINMDPRQAKDALKILKKRLGSKNPKIQLLALFALETLSKNCGENLFQQIIERDILQEMVKIVKKKPDLNVREKILILIDMWQEAFGGPSGRFPQFYAAYNELRSAGVEFPPREENRAPLFTPPQTQPIDFPTAEYDDAAIQASLQSDAAGLSLPEIQNAQGLADVLMEMLSALDPKNPEALKEEVIVDLVDQCRSYQTRVMHLVNNTADEQLLSQGLTLNDSLQRVLSRHDDIQKGTIKPGTTAGGAETSVLPLVNVSHEDDELEDDFDQLAHRSRDAQALGRKPAYDKAESVRVNQILPPPPPRKPVASDSSMIDYLSGDAYKVDNSQPTPFPVPSHSSPHPSSPPSHGMSTSPPTFTSQPVYDEPSKSADQLPPAPWDTQSTTVLPPPPSRYNQRQQFFEQQGTSHSSSGSNSSYDSLVGQTQNLSLNSSTPTKPEKPEDALFKDLVDFAKSKTSSSSKPNRSY 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0271 574 CDD VHS 87 212 - -
Mibi05g0271 574 ProSiteProfiles GAT domain profile. 255 343 IPR004152 GO:0035091|GO:0043130
Mibi05g0271 574 Pfam GAT domain 270 344 IPR004152 GO:0035091|GO:0043130
Mibi05g0271 574 SMART VHS_2 82 214 IPR002014 GO:0035091|GO:0043130
Mibi05g0271 574 Gene3D - 253 348 IPR038425 -
Mibi05g0271 574 PANTHER TOM1-LIKE PROTEIN 78 570 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mibi05g0271 574 MobiDBLite consensus disorder prediction 384 551 - -
Mibi05g0271 574 Pfam VHS domain 86 207 IPR002014 GO:0035091|GO:0043130
Mibi05g0271 574 CDD GAT_GGA_like_plant 263 341 - -
Mibi05g0271 574 PIRSF TOM1 73 573 IPR014645 -
Mibi05g0271 574 ProSiteProfiles VHS domain profile. 89 218 IPR002014 GO:0035091|GO:0043130
Mibi05g0271 574 FunFam TOM1-like protein 2 81 228 - -
Mibi05g0271 574 MobiDBLite consensus disorder prediction 483 545 - -
Mibi05g0271 574 SUPERFAMILY GAT-like domain 222 344 - -
Mibi05g0271 574 MobiDBLite consensus disorder prediction 384 398 - -
Mibi05g0271 574 MobiDBLite consensus disorder prediction 452 475 - -
Mibi05g0271 574 SUPERFAMILY ENTH/VHS domain 84 219 IPR008942 -
Mibi05g0271 574 Gene3D - 73 235 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0271 Mibi-ChrMibi05 2690961 2697928 Transposed