Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0266 ATGGATGGCCCTCCTTCAACGTCTTATGTCGTCCTTGCATGTGATGCCACCAAAGATATGAGTGAACATGAGATCAAGTCCATTCTTGATCACGTACGAGGTACCAGTGGCATTTTATATGCTGGTTGCAAATTGCTTGTGCTCGGCGTCTTGCATAAGGTGCCACATCCCATGGGGTACCAGACATTACCATGCCCGGAGTCTTTTGCTGGCACGAATTTTCGTGCAATGGATGAAGCAGTTGGCAAGAAACTTGATTCATATACAAATATGCTAATGCCTATGTATGAAGATTGGGAAAATGCTGGGATCATCATCGAAGTCAAAGTTATTGCAGGTTTTCCAATCAAACAGGTTATATTGCAAGAGGTTGCATGCTACAATGCTACTTGGATTGTGCTTGATAGGCATCTTCGACGGGATTTGAGATTCCTTAACAAGATACCAAGCAAGGTTGCATTGATAAAAGATGACTTGTCTGTGGATATCTGGAGGTCTCAAATATCACTCGAAACAGTAGTTGTCACGGAAAGCAAGCTTGCTCATTCTTTGTCTAAATTTGTTACTCTATCAGATTGTCAAAGTGTTGCTGACATCGGGCATTCTATTTCCTCTTACAAAAGCTGTCTCTCATCCATGATTTCTTCTGACAGCACAGACACATTTAGGAACAGTACAAAGCACTCATTTTCATCATTTGAACGATTCTTCACATCAGATTCCGAGTCGTCTTCTAAATCAGATAAAGATGCTGCAGTTCTTGAGTGGTCCCAAAGATATGCCATTGCTATTGGAACTGCAAAAGGATTGCGCTTTCTCCATGAAGAATGCCGTGGGGGCCCCATTATTCATCGAGATATGCGACCCAACAATATACTTCTTACTCATGATTTTCTAGGTGACTTTGGCCTTGCCAAATGGAAGACCGGTACCGATGAGACTGTGCAAACGAGAGTAATGGGCACATCAGGCGATATCATGAACATACTTTCTGTTTATATATGTAGATACCTTGCTCCTGAGTATGCTGAAGATGGCGTTGTTTCTGTGAGGACAGATGTGTATGCTTATGGCATTGTTCTGTTGCAATTAATATCAGGACGCAAGGTGGGCATGTACATTAATCCTGAACAACCATCTCTCCGTCAATGGGCTGAGCCATTGATTGAGAAGTTGGCTTTACCAGAACTCGTTGACCCACGTCTTGGGGAGTCATATGACACATATGAACTATACCTTATGGCAAAAGCAGCATTCTTCTGTGTGCAAAGAAAGCCTGAGATGCGCCCATCAATGGCAGAGGTTGTTCGCCTTTTTGAAGGACAAAATGATCATTTCCATGCCATGGCAGATCAGTTCGTGCCTAATTATTATGAATGA 1380 0.4261 MDGPPSTSYVVLACDATKDMSEHEIKSILDHVRGTSGILYAGCKLLVLGVLHKVPHPMGYQTLPCPESFAGTNFRAMDEAVGKKLDSYTNMLMPMYEDWENAGIIIEVKVIAGFPIKQVILQEVACYNATWIVLDRHLRRDLRFLNKIPSKVALIKDDLSVDIWRSQISLETVVVTESKLAHSLSKFVTLSDCQSVADIGHSISSYKSCLSSMISSDSTDTFRNSTKHSFSSFERFFTSDSESSSKSDKDAAVLEWSQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPNNILLTHDFLGDFGLAKWKTGTDETVQTRVMGTSGDIMNILSVYICRYLAPEYAEDGVVSVRTDVYAYGIVLLQLISGRKVGMYINPEQPSLRQWAEPLIEKLALPELVDPRLGESYDTYELYLMAKAAFFCVQRKPEMRPSMAEVVRLFEGQNDHFHAMADQFVPNYYE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0266 459 Pfam Protein kinase domain 256 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0266 459 SUPERFAMILY Protein kinase-like (PK-like) 252 444 IPR011009 -
Mibi05g0266 459 PANTHER OS01G0750732 PROTEIN 249 444 - -
Mibi05g0266 459 Gene3D Transferase(Phosphotransferase) domain 1 241 452 - -
Mibi05g0266 459 ProSitePatterns Tyrosine protein kinases specific active-site signature. 282 294 IPR008266 GO:0004672|GO:0006468
Mibi05g0266 459 ProSiteProfiles Protein kinase domain profile. 75 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0266 459 SMART tyrkin_6 39 439 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0266 Mibi-ChrMibi05 2656147 2659671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0266 249 444 Trihelix Transcription Factor Family AT1G70460 45.098 6.08e-41 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi05g0266 PK_Tyr_Ser-Thr 1.7e-14 CL0016