Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0259 ATGGAGGATTCTTCTTCATCTGCAGTTGAAGACACCAAGACTTGCCCTCGTGGTCACTGGAGACCCTCCGAGGATGAGAAACTCCGGCAGCTTGTTCAACAGTATGGTGCCCAAAACTGGAATTCCATCGCCGAGAAGCTCCACGGAAGATCAGGGAAAAGTTGCAGATTAAGGTGGTTCAATCAGCTAGATCCTAGGATTAACAGGAGGCCATTCACAGAAGAGGAGGAAGAGAGGCTACTTGCAGCTCATCGCATCCATGGGAATAAGTGGGCCCTCATAGCCAGGCTTTTCCCAGGCCGTACTGATAACGCTGTGAAGAATCATTGGCATGTTATAATGGCACGCAAGCAAAGAGAACAATCTAAGTTATGCGGCAAGAGAAGCTTTCAGGATCTTTATAGCTATAATGATCCTAATAACTACACTAGTTCCTCTAAGAAAATCACATCCAATTCTTGTCATGATGTGTTCATTAGCTCCAGAATGAGAAGTAGTGGAATAGAGAATAATAATGCCAGATTCTTTGATTTCCGTAGTAGCCTTGATCATCATAATAAAGATAGAACATTATTTGCGGATTCTCCCTCCACTTCTTTGGCTTCTTGGAGTTTTGCAACCTCTTCATCAAACGGTTCTCCGGTTGCGGATTCATTTAGAAGAGAAGGCAGCTATTTCTTCAATCCTCCTCATCACACCAACCATTACTTATCATCAGAAATAGCCAAAGGTTCAGATAGGTTTCACTACAGAATTTATCCGAATTCTTCAGCAAATTACAGGAGAGTCCTTCCATCATCAAGTGCTACTTTTGGACTTTTTGGTTCCAATGAAGATGGAAAGATAAAGAAGGAACTCACCAATTTCAGTGATAACTCGACACTCACCAAGTTAAGGGCTTCTACGGATGAGCGAGGGCAAGAAGATGATGAGCCAATAGAACAAAATAAAGAAGTTCCTTTTATTGATTTTCTTGGTGTGGGTGTCTCTTCGTCATAA 999 0.4234 MEDSSSSAVEDTKTCPRGHWRPSEDEKLRQLVQQYGAQNWNSIAEKLHGRSGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDLYSYNDPNNYTSSSKKITSNSCHDVFISSRMRSSGIENNNARFFDFRSSLDHHNKDRTLFADSPSTSLASWSFATSSSNGSPVADSFRREGSYFFNPPHHTNHYLSSEIAKGSDRFHYRIYPNSSANYRRVLPSSSATFGLFGSNEDGKIKKELTNFSDNSTLTKLRASTDERGQEDDEPIEQNKEVPFIDFLGVGVSSS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0259 332 MobiDBLite consensus disorder prediction 301 317 - -
Mibi05g0259 332 FunFam MYB transcription factor 17 68 - -
Mibi05g0259 332 PANTHER MYB PROTEIN-RELATED 17 160 - -
Mibi05g0259 332 CDD SANT 71 111 IPR001005 -
Mibi05g0259 332 Pfam Myb-like DNA-binding domain 20 80 - -
Mibi05g0259 332 MobiDBLite consensus disorder prediction 1 23 - -
Mibi05g0259 332 SUPERFAMILY Homeodomain-like 16 110 IPR009057 -
Mibi05g0259 332 CDD SANT 20 61 IPR001005 -
Mibi05g0259 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 63 IPR017930 -
Mibi05g0259 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Mibi05g0259 332 SMART sant 16 65 IPR001005 -
Mibi05g0259 332 SMART sant 68 116 IPR001005 -
Mibi05g0259 332 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Mibi05g0259 332 Gene3D - 71 131 - -
Mibi05g0259 332 MobiDBLite consensus disorder prediction 293 317 - -
Mibi05g0259 332 FunFam MYB transcription factor 70 140 - -
Mibi05g0259 332 ProSiteProfiles Myb-like domain profile. 17 63 IPR001005 -
Mibi05g0259 332 Gene3D - 17 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0259 Mibi-ChrMibi05 2593703 2595166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0259 14 124 MYB Transcription Factor Family AT1G17950 81.982 2.13e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi05g0259 Myb_DNA-bind_6 4.9e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0259 05 2593703 2595166 Mibi08g2441 08 42189252 42190615 CCT
Mibi05g0259 05 2593703 2595166 Mibi05g0259 05 2593703 2595166 ECH