Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0258 ATGTCATTAGTTAGATCTACTGAGCTGGCTACGGCATCATATAGAAATGCTAAACTCTACTCGCTCGAGGGAACTGATGCAAAGCCAGGGCTGTCCCGCCAAAGTTTTGATCCTGATCAGCAAAGAAGTATGTACGCGACAGATTCTTGCTCCAGTGAGAGTTATGAGAAGTACTTCCACGACTCACCAGTAGAAGAATTGACAGAACCATCAAGTTCTGGGGTCTCAAGCAGTTCATTTCGCCCGGATCATCCTTCTCCTCTCCAGCCCAGAGCTAGTTCAGGAGCTTCTATGGATGCTAATAACCCATTTGATACTTCTTTCATGTCCACGAGGCGTCATGATGCTTATTATCAATCCAATTTTAGATCAGATTTCTCAGAAAGTGAAAGCCTGGATGCACTTGAGTTTAATGGTCAAATGAGATTAAAACTGCAAGAATTAGAGAGGGCCCTGCTTGATGATGAGGAAGACATATTTGAGATTACTCAGAGCATGGAAATTGACCATGAGTGGGCCGATCCCATTCAGAACATGCAGCCCCATGACTCACCAAAGGAGTCTTCATCCTCAGATTCTGATCTCAGCAGCATCAATAGCAACAAAGAAGTATCACATATCTCTCCTCGGACCCCGAGAGAATTGCTTCTTGAATGTGCAGGTGTACTTTCAGAAGGAAATTCAAAGGAGGCCTCAGATATGATAAATAATCTCCGGAATATGGTCTCAATTCAGGGAGATCCTCCCCAGAGAATTGCAGCCTATATGGTTGAAGGACTTGCAGCTCGCCTGGCTGAGTCTGGAAAGTGTATTTACAAAGCCTTGAAATGCAAGGAGCCTCCTTCCTCAGATCGTCTGGCAGCAATGCAGATATTGTTTGAAGTGTGCCCATGTTTTAAATTTGGATTCATTGCTGCAAATGGTGCAATCACAGAGGCAGTGAAAGATGAAACCAAGGTGCACATAGTAGATTTTGACATCAACCAAGGAAGCCAATACATAACTCTTCTACAAACGCTTGCTTCAAGGCCAGGCAAGCCTCCACCCCACGTGAGATTGACTGGAGTTGATGATCCAGAATCTGTACAACGATCTGTTGGAGGCCTAAAGATCATAGGACAAAGACTTGAGAAGCTAGCAGAAGCACTAAAGCTGCCATTCGAGTTCCGAGCCGTGCCATCGAGGACATCCCTCATCACCCCTTCAATGCTCAAATGTCGCCCTGGTGAAGCACTTGTGGTGAACTTTGCATTTCAGCTGCACCACATGCCAGATGAGAGTGTTTCCACAGTGAACGAGAGAGACCAACTACTACGCATGGTTAAGAGCCTAAATCCAAAAGTTGTAACAGTTGTGGAACAAGATGTGAACACTAACACAACCCCTTTCTTCCCAAGATTCGTAGAAGCTTACAATTATTACTCTGCTGTTTTTGAGTCTCTTGATGTGACTCTTCCTAGGGAGAGTCAGGACAGGATGAATGTTGAGAGACAATGCTTAGCAAGGGACATTGTCAACATAGTTGCATGTGATGGTGAGGATCGGATTGAAAGGTATGAAGTTGCTGGGAAATGGAGGGCTAGAATGGCCATGGCTGGCTTCACTTCATCCCCATTGAGCAGTCATGTGACTGACTCGATTCGGGAACTCATCAGGCAGTATTGTGACAGGTACAAGATGAAGCAGGAAATGGGAGCTCTTCATTTTGGTTGGGAAGACAAGAACTTGATTGTTGCTTCTGCGTGGAGGTGA 1752 0.4521 MSLVRSTELATASYRNAKLYSLEGTDAKPGLSRQSFDPDQQRSMYATDSCSSESYEKYFHDSPVEELTEPSSSGVSSSSFRPDHPSPLQPRASSGASMDANNPFDTSFMSTRRHDAYYQSNFRSDFSESESLDALEFNGQMRLKLQELERALLDDEEDIFEITQSMEIDHEWADPIQNMQPHDSPKESSSSDSDLSSINSNKEVSHISPRTPRELLLECAGVLSEGNSKEASDMINNLRNMVSIQGDPPQRIAAYMVEGLAARLAESGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDETKVHIVDFDINQGSQYITLLQTLASRPGKPPPHVRLTGVDDPESVQRSVGGLKIIGQRLEKLAEALKLPFEFRAVPSRTSLITPSMLKCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKVVTVVEQDVNTNTTPFFPRFVEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTSSPLSSHVTDSIRELIRQYCDRYKMKQEMGALHFGWEDKNLIVASAWR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0258 583 MobiDBLite consensus disorder prediction 176 209 - -
Mibi05g0258 583 MobiDBLite consensus disorder prediction 34 53 - -
Mibi05g0258 583 Pfam GRAS domain family 213 583 IPR005202 -
Mibi05g0258 583 MobiDBLite consensus disorder prediction 181 206 - -
Mibi05g0258 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 578 IPR005202 -
Mibi05g0258 583 Coils Coil 138 158 - -
Mibi05g0258 583 MobiDBLite consensus disorder prediction 21 104 - -
Mibi05g0258 583 ProSiteProfiles GRAS family profile. 203 583 IPR005202 -
Mibi05g0258 583 MobiDBLite consensus disorder prediction 66 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0258 Mibi-ChrMibi05 2577044 2578795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0258 1 583 GRAS Transcription Factor Family AT1G21450 63.559 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi05g0258 GRAS 3.4e-136 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2443 08 42227113 42228723 Mibi05g0258 05 2577044 2578795 CCT
Mibi05g0258 05 2577044 2578795 Mibi05g0258 05 2577044 2578795 ECH