Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0247 ATGATACGATATTTGCAGGCTACGACTTGTACCTTTGACTGGCAATTGTATTCTGATCTAAAAGAAGGCTTTCAAAATTTGGGCCCAACATCTCCTGCAATTTGGGGACATTTTGCAATTCTTATTTACTGGGTTGATTTTTCTATTTCTTCGCTTCATCCCGCCTTATCCATAGTCTCTGCTTTCCACACATCCATCACAAAACAACTTTCAACAATTTCTTACTTTCCAACTCAGTCCTCACAATCAACCATGTCTAGCACAGCCGGTCAAGTTATCAAGTGCAGAGCTGCGGTGGCTTGGGAAGCCGGGAAGCCACTATCGATCGAAGAGGTGGAGGTGGCTCCTCCACAAGCTGGAGAAGTGCGTCTCAAGATTCTCTTCACTGCCCTCTGCCACACTGATGTTTACTTCTGGGAAGCCAAGGGACAAACTCCAGTGTTCCCTCGTATATTAGGCCACGAAGCCGGAGGGATTGTGGAGAGTGTAGGGGAGGGGGTGACTCATCTGAAGCCAGGAGATCATGCTCTTCCAGTATTTACAGGGGAGTGTGGGGAGTGCCCACATTGTAAGTCGGAAGAAAGCAACATGTGTGATCTTCTTAGGATCAATACGGACAGGGGTGTTATGCTCAGTGATGGGAAGTCCAGATTCTCTAAGAATGGAGAGCCAATTTTCCATTTTGTGGGAACTTCCACATTCAGCGAGTACACTGTTTTGCATGCTGGATGTGTTGCTAAGATTGACCCTGCTGCTCCCCTTGACAAAGTTTGTATTCTCAGCTGTGGAGTCTGCACAGGATTTGGTGCCACCGTGAATGTTGCTAAACCAAAACCTGGCTCCTCTGTTGCTATTTTTGGATTGGGAGCTGTTGGCCTCTCTGCTGCTGAAGGGGCAAGGGTTTCTGGGGCATCCAGAATTATTGGGGTTGATTTAGTTTCCAGCCGCTTTGAGCTAGCTAAGAAGTTTGGAGTCAACGAGTTTGTGAACCCAAAAGATCATGACAAACCTGTACAAGAGGTAATAGCTGAAATGACAAATGGAGGTGTGGATCGTGCGGTGGAGTGCACAGGGAGCATCCAGGCTATGATCTCAGCATTCGAATGTGTCCACGATGGATGGGGTGTGGCGGTACTGGTTGGAGTGCCAAACAAGGACGATGCATTCAAAACTCATCCAGTGAATTTCCTGAACGAGAGGACACTGAAGGGAACCTTCTACGGGAATTACAAGCCTCGTTCTGATCTGCCTTCTGTTGTGGACATGTACATGAGAGGGGAGCTGGAACTGGAGAAGTTCATAACTCACTCTGTACCCTTATCTGAGATCAACAAGGCATTTGACTACATGCTCAAAGGGGAGTCCATCAGGTGCATCATTCGCATGGAAGAGTAG 1395 0.4746 MIRYLQATTCTFDWQLYSDLKEGFQNLGPTSPAIWGHFAILIYWVDFSISSLHPALSIVSAFHTSITKQLSTISYFPTQSSQSTMSSTAGQVIKCRAAVAWEAGKPLSIEEVEVAPPQAGEVRLKILFTALCHTDVYFWEAKGQTPVFPRILGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLSDGKSRFSKNGEPIFHFVGTSTFSEYTVLHAGCVAKIDPAAPLDKVCILSCGVCTGFGATVNVAKPKPGSSVAIFGLGAVGLSAAEGARVSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPVNFLNERTLKGTFYGNYKPRSDLPSVVDMYMRGELELEKFITHSVPLSEINKAFDYMLKGESIRCIIRMEE 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0247 464 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 253 427 IPR036291 -
Mibi05g0247 464 Pfam Alcohol dehydrogenase GroES-like domain 120 246 IPR013154 -
Mibi05g0247 464 Gene3D - 267 405 - -
Mibi05g0247 464 SUPERFAMILY GroES-like 88 270 IPR011032 -
Mibi05g0247 464 Gene3D - 103 454 - -
Mibi05g0247 464 FunFam Alcohol dehydrogenase class-P 267 405 - -
Mibi05g0247 464 SUPERFAMILY GroES-like 412 461 IPR011032 -
Mibi05g0247 464 CDD alcohol_DH_plants 93 461 - -
Mibi05g0247 464 PANTHER ALCOHOL DEHYDROGENASE 90 460 - -
Mibi05g0247 464 Pfam Zinc-binding dehydrogenase 290 421 IPR013149 -
Mibi05g0247 464 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 153 167 IPR002328 GO:0008270|GO:0016491
Mibi05g0247 464 FunFam alcohol dehydrogenase 1-like isoform X1 103 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0247 Mibi-ChrMibi05 2497260 2502379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0247 85 454 Monolignol Biosynthesis Gene Families AT1G72680 24.800 4.18e-15 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0247 05 2497260 2502379 Mibi05g0247 05 2497260 2502379 ECH