Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0235 ATGGAATATTCAGGGTGGTTGAAAGGCAATAAGAATAATAATAATAACAACAATAAGATGGAAGGAGCTCCGTCATGCCCCAGATGTGCATCATGCAACACCAAGTTCTGTTACTTCAACAACTACAGCTTCTCCCAACCCAGATACTTCTGTAAATCGTGCCGCCGTTACTGGACCAAAGGTGGCTCTCTCCGCAACGTCCCAGTGGGTGGCGCCTCTCGTAAGTCCCGTCCTCCTAATAAACCTTCCCGCCACTCCGCCATCTCTCTCATTTCCTGTCCCCGCCGCCACCATGATACCCCTAATTCTGATGAATCCGGTGGGTCCCCCCATATCGACATGGCCCTCTTGTTCTCCAACTTCGTCAACCATAACACCACCACCACCACCACCATGAATACTGCAGGATCCTCACCCGATCAAAGCGTTGGAGCCCTGAAGGAGGAGGAGACTCATCCACCACCGTCTGATTATTGTGATGATGATATGACAGATGGGATTTGTCAGGGAGGTCATCACCAGAGTCTTTCGGGACATGATTATGAGTTGGATGATTTGTTCGGAGGGGATGATGAAGTCATGCATGATGTTTTGTGGTCTGATTTTACGACCTCCTTCACTTGGCAACCTCCTCCAACTCCTATCATGCCTTTTCCTTTTCCTCATGACTTGGACTACTCCTCCCAAGACGATCTCTTCCCAATTCCTTCTCTTTAA 717 0.4881 MEYSGWLKGNKNNNNNNNKMEGAPSCPRCASCNTKFCYFNNYSFSQPRYFCKSCRRYWTKGGSLRNVPVGGASRKSRPPNKPSRHSAISLISCPRRHHDTPNSDESGGSPHIDMALLFSNFVNHNTTTTTTMNTAGSSPDQSVGALKEEETHPPPSDYCDDDMTDGICQGGHHQSLSGHDYELDDLFGGDDEVMHDVLWSDFTTSFTWQPPPTPIMPFPFPHDLDYSSQDDLFPIPSL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0235 238 MobiDBLite consensus disorder prediction 65 86 - -
Mibi05g0235 238 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Mibi05g0235 238 Pfam Dof domain, zinc finger 25 77 IPR003851 GO:0003677|GO:0006355
Mibi05g0235 238 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 142 IPR045174 GO:0003700|GO:0006355
Mibi05g0235 238 MobiDBLite consensus disorder prediction 128 154 - -
Mibi05g0235 238 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0235 Mibi-ChrMibi05 2420829 2421545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0235 15 123 C2C2-Dof Transcription Factor Family AT3G52440 59.091 3.86e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi05g0235 zf-Dof 1.8e-30 No_clan