Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0231 ATGATGGGGAACAGACTGGAATTGTTGTTCGTGTTCTCAACAACAGCCTTCCTAATCGGAGCAATGTTCTTATGTGTTGGAGCTGAGCCGGTGGAAGATAAGAAAGCCTTGCTTGATTTCCTTCACAACATAAACCACTCTCTTTCTTTAAACTGGGATCATGAGAAATCTTCTGTATGCACTAGCTGGAGAGGAATCACCTGTGATAGAGACCATTCCAGAGTCATAGGTCTTCGTTTACCTGCAGTTGGATTGAGAGGTCCAATACCATCCAACACCTTAAGTCGCCTCTCAGCACTTCAGATTGTGAATCTAACATCTAATAGTATAACGGGTCCTTTTCCTTCTGGTTTCTCTCAGCTTAAGAATTTAACCTATCTTAACATTCAGTTCAACGAGTTTTCTGGCCCATTGCCATCAGATTTCTCAGTTTGGAAGAATTTGACTGTTGCTGATTTATCCGACAATTTTTTTAATGGGAGCATTCCTTCATCATTTTCAACTCTGACTCATCTGACATCTTTAGTCTTGGCAAATAACTCCCTTTCGGGTGAAATTCCTGACATCAATACTCCTACCCTGCAAGAGCTGAATCTGGCCAACAATAACCTTAGTGGGATGGTTCCCAAATCCCTTCTGAGATTCCCAAGTTGGGCGTTTTCAGGGAACAATCTCTCATTGGCAAATGCTCGTCCAAGAAAGAAAGCCTCAAAAAGGCTAGGTAAGTCTGCATTAATAGGTGTCATTGTAGGTTGTAGTGGGCTGGCACTTGGAGTTATTGCAGCTTTCTTGCTTTTGCGCTACTACGATAAAGGAGGTGAAAATGGGCTAGCAATGAAATCCCAGAAAAAAGATATGTTCCTGAAGAAGGATATCTCTGAGAGCCATTGCAGAAAAAACAAGATTGAGTTCATTGAGGATTGCAATTTCGCGTTTGACCTGGAGGATTTATTGAGAGCATCTGCTGAGGTCCTTGGAAAGGGGACTTATGGCACAACATATAAGGCAAATATAGAGGACGCTTCCACGGTGGTGGTGAAGAGATTGAAAGAAGGAATCATCGGAAAACGTGAGTTTGAACAGCAGATGGAGGTTGTGGGAAGGATTAGGCACGACAATGTGGTGGCTCTAAGGGCATATTACTATTCCAAGGAGGAGAAACTCATGATTTATGATTACTATGAACAGGGTAGCGTTTCTGCTATGTTGCACGGTAGAAGAGGGGAAGAAAGGATTTGTTTAGGTTGGGATAGCAGGCTGAGGATTGCAATAGGTGCAGCAAGGGGCATTGCTCACGTGCATGCTCAACAAGGAGGAAAACTTGTGCATGGAAACATAAAAGCCTCCAACATCTTCCTCAACTCCGAAGGCTATGGCTGTATTTCTGACACTGGTTTAGCAACATTGATGAGTCCAATAATGCCACCATCTATAAGAAGTTCTGGCTACCGTGCTCCAGAAGTAACGGACCCCAGAAAAGCAAGCCATGCCTCTGATGTCTACAGCTTTGGGGTGTTCCTTTTGGAGCTTTTGACTGGAAAAGGTCCTATGCACGCCACATCAAGTGAGGAGGCCATTCACCTGGTTAGGTGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCTGAAGTATTTGATGTGCAGTTGCTGAGATTTCCAAATATAGAGGAAGAAATGGTACAAATGTTACAACTTGCTATGGCATGTGTTGTACGAATTCCAGAGCAGAGACCAAAAATGCCAGATGTTTTAAGAATGATGGAGGATATTCTTCGACCAAATAATTCTGAGAATCGGCTTTCGTCTGAATCCAGATCAGCAGCTTCCACCCCTACACAACCACCACTTGACGTGCCTTCTTCCTCTGTGGATATTTAG 1878 0.4356 MMGNRLELLFVFSTTAFLIGAMFLCVGAEPVEDKKALLDFLHNINHSLSLNWDHEKSSVCTSWRGITCDRDHSRVIGLRLPAVGLRGPIPSNTLSRLSALQIVNLTSNSITGPFPSGFSQLKNLTYLNIQFNEFSGPLPSDFSVWKNLTVADLSDNFFNGSIPSSFSTLTHLTSLVLANNSLSGEIPDINTPTLQELNLANNNLSGMVPKSLLRFPSWAFSGNNLSLANARPRKKASKRLGKSALIGVIVGCSGLALGVIAAFLLLRYYDKGGENGLAMKSQKKDMFLKKDISESHCRKNKIEFIEDCNFAFDLEDLLRASAEVLGKGTYGTTYKANIEDASTVVVKRLKEGIIGKREFEQQMEVVGRIRHDNVVALRAYYYSKEEKLMIYDYYEQGSVSAMLHGRRGEERICLGWDSRLRIAIGAARGIAHVHAQQGGKLVHGNIKASNIFLNSEGYGCISDTGLATLMSPIMPPSIRSSGYRAPEVTDPRKASHASDVYSFGVFLLELLTGKGPMHATSSEEAIHLVRWVNSVVREEWTAEVFDVQLLRFPNIEEEMVQMLQLAMACVVRIPEQRPKMPDVLRMMEDILRPNNSENRLSSESRSAASTPTQPPLDVPSSSVDI 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0231 625 MobiDBLite consensus disorder prediction 594 625 - -
Mibi05g0231 625 ProSiteProfiles Protein kinase domain profile. 319 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0231 625 ProSitePatterns Protein kinases ATP-binding region signature. 325 356 IPR017441 GO:0005524
Mibi05g0231 625 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 394 601 - -
Mibi05g0231 625 SUPERFAMILY Protein kinase-like (PK-like) 323 597 IPR011009 -
Mibi05g0231 625 Pfam Protein kinase domain 322 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0231 625 SUPERFAMILY L domain-like 36 215 - -
Mibi05g0231 625 FunFam pollen receptor-like kinase 1 289 393 - -
Mibi05g0231 625 Gene3D Ribonuclease Inhibitor 31 234 IPR032675 -
Mibi05g0231 625 Gene3D Transferase(Phosphotransferase) domain 1 394 611 - -
Mibi05g0231 625 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Mibi05g0231 625 FunFam Probable inactive receptor kinase RLK902 30 190 - -
Mibi05g0231 625 PANTHER OS05G0588300 PROTEIN 17 603 - -
Mibi05g0231 625 MobiDBLite consensus disorder prediction 592 625 - -
Mibi05g0231 625 Pfam Leucine Rich Repeat 194 221 IPR001611 GO:0005515
Mibi05g0231 625 Gene3D Phosphorylase Kinase; domain 1 285 393 - -
Mibi05g0231 625 ProSiteProfiles Leucine-rich repeat profile. 193 214 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0231 Mibi-ChrMibi05 2386873 2389057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0231 28 614 Receptor kinase-like Gene Family AT4G23740 53.507 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi05g0231 Pkinase 2.7e-32 CL0016