Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0226 ATGGATGACAGCTTTTCTGATATTCTTGTAGACAGAGAATTTGGCGGGGACGATCTGTTTGCCATTTTGGAGAGCCTTGAAGACTTCTCCGACATTCCTCCCGTTGATGAAGCTGTTGTTATCACTAAGGAGAACGAGGAAACTTCAAGGTTTGTGTCACAAAAGTCAACTTCCTCAAGTGCTCTACAAGAGCCTGAAGAAACTGAGCTTGAAGCTTCACCCAAAAGCAAGAGACAGAAGCTCACTCCCACCACTTCGTCGGAGGATCCAAACCCAGATGGTCAACAAAGGATATCTCACATCACTGTTGAGCGCAACCGAAGGAAGCAAATGAACGAGCACTTGTCCGTCTTAAGGTCACTCATGCCAAACTTTTATGTCGCACGTGGAGACCAAGCTTCAATAATTGGAGGGGTGGTTGATTACATAAACGAGTTGCAGCAGGTTTTACAGTCCCTGGAAGCCAAGAAGCAAAGAAAAGTATACAGTGAAGTGCTAAGCCCTAGGCTAGTAGTCTCAAGTCCAAGTCCAAGGCCTTCAGCTCTTAGTCCTAGGAAGCCCTCAATGAGCCCGAGGCTAAGCTTGCCCATTAGTCCCAGGACTCCACAACCAGGTAGTCCTTACAGGCCCAGGTTGCAGCAGCAAGGTTACCTTTCTCCCACCATCTCCAACTCTCTGGAGCCATCTCCTACCTCTTCTGCTGCTTCCTCCTCCATCAACGATAACATCAATGAGCTTGTGGCCAATTCCAAGTCTGCTATGGCCGATGTGGAGGTCAAGTTTTCTGGGCCACACGTTCTTTTGAAAACGGTTTCTCCGCGTATCCCAGGGCAAGCTTTGAAGATCATATCAGCACTTGAGGACCTATCTCTTGAAATCCTCCATGTCAGCATCAGCACTGCTGATGAAACCATGCTGAACTCTTTCACCATTAAGATTGGAATTGAATGCCAACTCAGTGCGGAAGAACTCGCTCTACAAATCCAGCAAACATTCTGTTGA 1002 0.4741 MDDSFSDILVDREFGGDDLFAILESLEDFSDIPPVDEAVVITKENEETSRFVSQKSTSSSALQEPEETELEASPKSKRQKLTPTTSSEDPNPDGQQRISHITVERNRRKQMNEHLSVLRSLMPNFYVARGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRLVVSSPSPRPSALSPRKPSMSPRLSLPISPRTPQPGSPYRPRLQQQGYLSPTISNSLEPSPTSSAASSSINDNINELVANSKSAMADVEVKFSGPHVLLKTVSPRIPGQALKIISALEDLSLEILHVSISTADETMLNSFTIKIGIECQLSAEELALQIQQTFC 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0226 333 Coils Coil 139 159 - -
Mibi05g0226 333 MobiDBLite consensus disorder prediction 170 213 - -
Mibi05g0226 333 FunFam Transcription factor SPEECHLESS 87 161 - -
Mibi05g0226 333 Gene3D - 87 160 IPR036638 GO:0046983
Mibi05g0226 333 PANTHER TRANSCRIPTION FACTOR FAMA 15 332 IPR044283 GO:0003700|GO:0010052
Mibi05g0226 333 SMART finulus 101 152 IPR011598 GO:0046983
Mibi05g0226 333 MobiDBLite consensus disorder prediction 77 98 - -
Mibi05g0226 333 MobiDBLite consensus disorder prediction 45 98 - -
Mibi05g0226 333 MobiDBLite consensus disorder prediction 51 66 - -
Mibi05g0226 333 Pfam Helix-loop-helix DNA-binding domain 96 147 IPR011598 GO:0046983
Mibi05g0226 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 95 146 IPR011598 GO:0046983
Mibi05g0226 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 94 164 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0226 Mibi-ChrMibi05 2319837 2321997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0226 9 313 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G53210 54.783 2.33e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi05g0226 HLH 1.7e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0226 05 2319837 2321997 Mibi05g0226 05 2319837 2321997 ECH