Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0225 ATGGATGACTCCAACGCCCATAGCCTCATCAACCAGCTTCTCCATGGGAGGGACATCGCAAGACGCCTTCAATTATCTCTCAATGACCCTTCCACTTCCCCTCAAACCCCTCACATGTTCATCCTTGACATCATTTCCACGTTTGACAATGCCCTCTCTCTGCTCAACGCCGCCGCCGCCGCCGCCCCTCCTCTGCCGGAGTCACCGCCGATCACTCCTCGCAGCCCTGACTCCCAAAAGCAATTCCAGCCCCAACAACACCAAAACACGTCAGCAAGATGGACTAAACATATTAGAATTGGCCCAGGGATGGCCGTGGAGTCCCTTCTCGACGATGGATTTAGCTGGAGGAAGTATGGCCAGAAAGACATCCTTGGAGCCAAATTCCCTAGAGGATATTATAGATGTACGCATAGACACGCGCAAGGATGCTTGGCTACAAAGCAAGTTCAACGATCAGACCAAGACCCGACCATCATGGAAGTCAATTACAGAGGAAATCACACCTGCAAGCTCCCTTCCACCTCTGTTCCTCCATCACAAGACCAGCTAGTGAACCTGCGTGCAGGCCTGAGGGTTCTGACGGACAATTTGAATGCCTCTGACCGAACCTCTTTTGCTTCATTCTTATTGCCTTCCACTTCCAACGTCAGACCTGACAGCCTCGAAAACAATGTTGTTGAGAACTTTAGTTCTACTCCCCACGAGTCCCCTGCTACCTCTGAAACTGCTCATTTCTCGAATAGCTTTGGAGGGCCTCTCAATTTGCCTCCTTCCACTTCTCACATTAACAACCCCATCTCTCCGGCGAGCGATCCAGCCGTTGCTCCCCAGTTTCCTTTTGATCACTTCGAATTTGAAGGCCCCAACTTCACATTTCATGACCCACGATACTTTTAA 900 0.5078 MDDSNAHSLINQLLHGRDIARRLQLSLNDPSTSPQTPHMFILDIISTFDNALSLLNAAAAAAPPLPESPPITPRSPDSQKQFQPQQHQNTSARWTKHIRIGPGMAVESLLDDGFSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQRSDQDPTIMEVNYRGNHTCKLPSTSVPPSQDQLVNLRAGLRVLTDNLNASDRTSFASFLLPSTSNVRPDSLENNVVENFSSTPHESPATSETAHFSNSFGGPLNLPPSTSHINNPISPASDPAVAPQFPFDHFEFEGPNFTFHDPRYF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0225 299 ProSiteProfiles WRKY domain profile. 105 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0225 299 SMART WRKY_cls 110 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0225 299 MobiDBLite consensus disorder prediction 62 93 - -
Mibi05g0225 299 MobiDBLite consensus disorder prediction 230 252 - -
Mibi05g0225 299 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 241 IPR044810 GO:0003700
Mibi05g0225 299 MobiDBLite consensus disorder prediction 74 93 - -
Mibi05g0225 299 FunFam WRKY transcription factor 53 96 173 - -
Mibi05g0225 299 Pfam WRKY DNA -binding domain 111 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0225 299 Gene3D WRKY domain 104 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g0225 299 SUPERFAMILY WRKY DNA-binding domain 108 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0225 Mibi-ChrMibi05 2314459 2315517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0225 10 199 WRKY Transcription Factor Family AT5G24110 39.000 2.39e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi05g0225 WRKY 2.8e-26 CL0274