Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0219 ATGAATATTGGCCTCCTCCTCTGGTTCTACATTTTTCCTCCAACAAGCATAGAAATATGCTCAGACGCCGTTTGCCAGAACGGGAACCCAATAATCCGTTTCCCGTTTCGAATCAAACAGAATCAGCCAAAGTCATGTGGTTATCCAGGTTTTGACGCATCTTGCAGTAAACATGGCCAAACAAAGCTGAAACTCCCTCACTCCGGAGAAGAATTCAGCGTCAAACGAATAGATTATGCCGCACAACAACTATGGATCAATGATCCCAAAAAGTGCCTCCCAAGGCGAATCCTCTCCCTCAACCTCACAGGATCACCATTCAGTGGCGTCTATTATCAAGATTTCTCGTTCTTCAACTGTTCCTCACAATATCTCAAGTATCGGTATACACCGATTGATTGCCTTAGCGATTCGAAGCACACTGTTTTTGCCACGCCTTCGGTATCAGTTTACAGGCACTTGTTGGCGGTTTGTGATTTCATGAGTAGGGTTAGGGTTCCGGTGAAGCAGCCGTTTTACGAGCACGTGATGTCGTCGGACCTGAGCGATGATCTACGGTTCTCGTGGGAATCGCCGCCGTGTGGGAGGTGTGAATCTCGCGGTGGACGGTGTGGCTTCAGAACTAATTCAACGGCTGACATTGCTTGTGCCTTCTTTCCTTCCCAAGGTATTTCAAAGGCAGCACGATATATCATCAGCATAAGCATAGGAGTGCCTGCAGTGTTGGGCCTCATTGCGCTACTATATTACATTGGCGGAAGGTGTAGGAGGGCCCAGGGAATTGTTGGATCACAACGAGAGCCCGCAATAGCATCGGGGCTTGATGGGCCGACAATAGAGTCGTACCCAAAGCAAGTGGTGGGAGAGGGGGAGGAAGGGACGTGCCCAATATGCCTGAGTGAGTACAGGCCCAATGAGACGTTGAAGACCATTCCAGCATGCCTCCACTCTTTCCATTCTCATTGCATCCATGCATGGCTTCTCCTCAGTGCTTCCTGCCCTATTTGTAGAACTTCTCCCCCCAACTCTCCCGCTTGA 1038 0.4942 MNIGLLLWFYIFPPTSIEICSDAVCQNGNPIIRFPFRIKQNQPKSCGYPGFDASCSKHGQTKLKLPHSGEEFSVKRIDYAAQQLWINDPKKCLPRRILSLNLTGSPFSGVYYQDFSFFNCSSQYLKYRYTPIDCLSDSKHTVFATPSVSVYRHLLAVCDFMSRVRVPVKQPFYEHVMSSDLSDDLRFSWESPPCGRCESRGGRCGFRTNSTADIACAFFPSQGISKAARYIISISIGVPAVLGLIALLYYIGGRCRRAQGIVGSQREPAIASGLDGPTIESYPKQVVGEGEEGTCPICLSEYRPNETLKTIPACLHSFHSHCIHAWLLLSASCPICRTSPPNSPA 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0219 345 Pfam Wall-associated receptor kinase C-terminal 153 217 IPR032872 -
Mibi05g0219 345 Pfam Ring finger domain 294 337 IPR001841 -
Mibi05g0219 345 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 340 - -
Mibi05g0219 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 342 IPR013083 -
Mibi05g0219 345 ProSiteProfiles Zinc finger RING-type profile. 295 337 IPR001841 -
Mibi05g0219 345 Pfam Wall-associated receptor kinase galacturonan-binding 20 88 IPR025287 GO:0030247
Mibi05g0219 345 SMART ring_2 295 336 IPR001841 -
Mibi05g0219 345 SUPERFAMILY RING/U-box 290 340 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi05g0219 Mibi-ChrMibi05 2238347 2241592 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0219 20 345 C3H Transcription Factor Family AT2G46495 36.686 2.31e-66 211