Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0215 ATGTATGCGGATACTGGTCTCTTGTTCCCATATTTCCAGAATCTATCTCAAGAGCTTCAACAACTCGATGAGTACTGTCGAACCCATAAGCCCAATGCTCCAGTGAGTGACTATGCTCAGTCATCAGCCATGTCGGAGTATTTTGATTTGGCAGCAGAAGGAGACCTGTTCAAAGCTCCTGAGCCTATAATCGAAGAACCAATGATAGACTTGGATCCCATGAACGCAGCCATTTCAATGGTATCTTGTGGGGAAGATGGTGTCTCCTCACAGGGACTAAAACCCTCAGACTCTCTTCAACATGAACAACTTCTGAGCGATGTTTTCTATGAATGCAAAAAAGATATGTTAGAAAAGGAAGCGCTTGGGTCACCACTATCTGAGATTCTGGAAATCAAGGTTCCTTCTCTGGGTACAGATGAAAACCAAATTCAAGAAAGCAAACCTTTTCCTGACTTGCCTTTACCAAAAAGTGTGAGTTCAGGATGTTTGAGCTCAATGGATTGGGTGCAAGGAACTGCAATGAACCCTGCTTTTATTGATTTGCCAGGAATTAATTTCTGTGCAGACTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTTGGCAATGGTAATATGCATGTTATCCAGTCTCCCTTAGAGAGACCCTTTCCTATCAGTAACTGTACCAGTGAGGAACGCCGAGAAAAGCTATCCAGATACAGGAGTAAGAAGACAAGGAGAAATTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGATAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACTGAAGAATATGACGTCAGGAGGCAATGTTAG 849 0.4358 MYADTGLLFPYFQNLSQELQQLDEYCRTHKPNAPVSDYAQSSAMSEYFDLAAEGDLFKAPEPIIEEPMIDLDPMNAAISMVSCGEDGVSSQGLKPSDSLQHEQLLSDVFYECKKDMLEKEALGSPLSEILEIKVPSLGTDENQIQESKPFPDLPLPKSVSSGCLSSMDWVQGTAMNPAFIDLPGINFCADYGMRRAFSEGDIKALGNGNMHVIQSPLERPFPISNCTSEERREKLSRYRSKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEEYDVRRQC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0215 282 Pfam CCT motif 231 273 IPR010402 GO:0005515
Mibi05g0215 282 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Mibi05g0215 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 154 273 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0215 Mibi-ChrMibi05 2174522 2177289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0215 180 277 C2C2-CO-like Transcription Factor Family AT3G21880 35.294 8.50e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi05g0215 CCT 5.4e-17 CL0281