Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0188 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTGAAACAGCCAGTGGTGGAAGGTTCAATTCAAAAGCCTCCTCCTATGAGCGAAAGAAAAGCAAGGCCTCAGAAAGATCAAGCTTTGAACTGCCCAAGGTGCAATTCAACCAACACTAAATTCTGCTACTACAATAACTATAGCCTCTCTCAGCCAAGATACTTCTGCAAGACTTGTAGAAGATACTGGACCGAAGGTGGGTCCCTCAGAAACGTTCCCGTGGGAGGAGGCTCAAGAAAGAACAAGCGATCTAATAATTTATCTAACTCTTCTTCTTCATCCTCGTCAAAGAAGCTTCCTGATCTGAACCCCAAGATCCATCAAGGCCAAGATCTTAACTTAGCATGCCCACTACCACCACCACCACCTCCACCAGAAGACTATAACAATAGCTTATCAAAATTTATGGAGGTTCGTTTTAGTACTGAAGACAAGACTGGCACTACAACTTTGTGTTCTTTGATGCCTATGTCGGCGGGGTTGGATTCTACGGCTTCAGCAATGTATAATTCAGGTGGGTTTCCTAATTTGCAGGATTTTAAGCCTCCTCCTCCTGGGCTTAGTTTCAGTCTTGAAGGGTTTGCAAATGGGTACGGGGGTATTTCTGGAAATAGTGGCGGTGGAGATGATGGTGGTGCTAGGTTGTTGTTTCCTAATGCTGAGGATTTGAAGCAAGGCGTCGTTCCAACTAGTACCGATCATTATGACCATAATAGAAGCCATGCGGATTCAACGGGGTTTTGGAATGGCATGTTAGGTGGAGGATCCTGGTAA 810 0.4568 MDTAQWAQGIGVVKQPVVEGSIQKPPPMSERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSNNLSNSSSSSSSKKLPDLNPKIHQGQDLNLACPLPPPPPPPEDYNNSLSKFMEVRFSTEDKTGTTTLCSLMPMSAGLDSTASAMYNSGGFPNLQDFKPPPPGLSFSLEGFANGYGGISGNSGGGDDGGARLLFPNAEDLKQGVVPTSTDHYDHNRSHADSTGFWNGMLGGGSW 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0188 269 Pfam Dof domain, zinc finger 38 95 IPR003851 GO:0003677|GO:0006355
Mibi05g0188 269 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 135 IPR045174 GO:0003700|GO:0006355
Mibi05g0188 269 MobiDBLite consensus disorder prediction 82 139 - -
Mibi05g0188 269 MobiDBLite consensus disorder prediction 90 113 - -
Mibi05g0188 269 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Mibi05g0188 269 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
Mibi05g0188 269 MobiDBLite consensus disorder prediction 18 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0188 Mibi-ChrMibi05 1891726 1893064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0188 28 269 C2C2-Dof Transcription Factor Family AT3G61850 42.294 1.15e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi05g0188 zf-Dof 1e-33 No_clan