Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0181 ATGGCGGGTTCGTCTGAGACGAAGTTCGTCCAAGATTTGGTATTGTACGCGGCGAGTGCGGCACTCAGCTGCTTGGTTTTGTTCGCTGGGCTTCGACACCTCGACCCTAATCGTGGGACATCCAAGAAAGCTCTTCAACATAAGAAAGATTTGGCCAAGCGTCTCGGTCGTCCTCTCATTCAAACAAACGCTTACGAGGATGTCATAGCTTGTGATGTTGTCAATCCCGACCACATTGATGTGAAGTTTGACTCTATTGGGGGACTGCAAACGATCAAGCATGCTCTGTTTGAGCTTGTTATACTGCCGCTAAAACGACCTGAATTATTTTCTCATGGCAAACTTCTTGGCCCACAAAAGGGGGTCCTCTTGTATGGGCCCCCTGGTACTGGGAAAACCATGCTTGCCAAAGCTATTGCAAAGGAGTCTGGATCAGTTTTTATTAATGTACGGACATCAAATCTGATGAGCAAGTGGTTTGGTGATGCCCAGAAACTTGTGGCTGCTGTATTTAGCCTGGCTTATAAGCTCCAGCCTGCTATCATATTCATCGATGAAGTTGACAGCTTTTTGGGTCAGTGTCGTACTACAGATCATGAGGCAATGCTAAACATGAAAACTGAGTTCATGACTTTATGGGATGGATTTACCACCGATCAGAATGCTCGAATTATGGTCCTCGCAGCAACCAATCGTCCCTCAGAACTTGATGAGGCCATATTACGGCGGTTTCCTCAAGCCTTTGAAATTGGACTTCCAGACCTAAGTGAGAGGGCTGAGATATTGAGGGTTATCTTAAAGGGGGAGAGAGTTGATGACAACATTGATTTTGATCATATAGCTGCCTTGTGTGAGGGATATACTGGTTCAGATCTGTTTGACCTCTGCAAGAAGGCTGCCTATTTTCCCATTAGGGAACTGCTCGATGTAGAAAAGCAAGGGAGAAATGCTCCTGGACCACGGTATTTGACACAGTCAGATTTGGAGAAGGCTTTCACCACTTCACGGAAAACGAGGGTTGCTGCTGGTGAATACAGTGGGTTAAATGTACAATCAGGAAGAAGGCCAGGACAGAGAGAATCAGGTGATTATCAGTTTCAAGCTGCAATCAATGAACTCTCTAAGCTTGTGGTTTCTCAAATTATTAACCTCCCATCAGATGCGCAGGATCCTTAA 1176 0.4566 MAGSSETKFVQDLVLYAASAALSCLVLFAGLRHLDPNRGTSKKALQHKKDLAKRLGRPLIQTNAYEDVIACDVVNPDHIDVKFDSIGGLQTIKHALFELVILPLKRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGSVFINVRTSNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQCRTTDHEAMLNMKTEFMTLWDGFTTDQNARIMVLAATNRPSELDEAILRRFPQAFEIGLPDLSERAEILRVILKGERVDDNIDFDHIAALCEGYTGSDLFDLCKKAAYFPIRELLDVEKQGRNAPGPRYLTQSDLEKAFTTSRKTRVAAGEYSGLNVQSGRRPGQRESGDYQFQAAINELSKLVVSQIINLPSDAQDP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0181 391 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Mibi05g0181 391 FunFam ATPase family AAA domain-containing protein 1 80 256 - -
Mibi05g0181 391 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 342 - -
Mibi05g0181 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 331 IPR027417 -
Mibi05g0181 391 CDD AAA 116 252 - -
Mibi05g0181 391 Gene3D - 80 338 IPR027417 -
Mibi05g0181 391 SMART AAA_5 118 254 IPR003593 -
Mibi05g0181 391 Pfam AAA+ lid domain 274 309 IPR041569 -
Mibi05g0181 391 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Mibi05g0181 391 Gene3D - 253 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0181 Mibi-ChrMibi05 1811417 1814191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0181 41 318 Calmodulin-binding Proteins AT3G56690 32.270 1.48e-37 142