Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0170 ATGGGACATTGCTGCAGCAAAAACCTTGCAGCCGTGGACAATGAAACATCACAACCAGACTCTAACAATAAGCCTCCTCATTCCTCTTCTTCTGTCTCCGGAGTCACCGATGGCCGCAATAGTTACGCCAATTCAAGTCCCTTTAACAGTCCCCTTCCGCCGTCGCCGGGTGGAACTCCGGGAAGAAAATTCCGGTGGCCTCTGCCGCCGCCGTCGCCGGTGAAGCCGATCATGACGGCAATACTTAAACGGCAGGGAAAGTCTCAGCCTAAGGAGGGGTCAATACCGGAGGAGCAAGGAGAAAGCACACCTTGTGGTGAGAGGCCGTTGGATAAGAGCTTTGGGTATGCCAAGAATATTGGAGCTAAGTATGAGTTGGGGAAGGAAGTGGGTCGAGGGCACTTTGGTCATACTCACCTGGCCAAAGCAAAGAAAGGAGTGCTTAAGGGGCAGTCTGTTGCTGTTAAGATAATATCCAAAGCTAAGATGACAACGGCCATAGCAATTGAAGATGTACGGAGGGAGGTGAAAATGTTGAAAGCCTTATCTGGTCATAAAAATGTAGCCAAGTTTCATGACGCATTTGAGGATGCCAATAACGTCTACATAGTGATGGAATTGTGTGATGGAGGAGAACTCCTTGATAGAATTCTCTCAAGAGGGGGAAGATACACAGAAGCAGATGCTAAAGCTATTATTGTCCAAGCTCTAAACGTAATGGCCTATTGCCATCTTCAAGGAGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTCTTTGTCTCAAAAGATGATGATGCTCCGATGAAGGTCATTGACTTTGGTCTATCTGATTTCATGAGACCAGATCAACGGCTGACTGATGTTGTTGGGAGTGCCTACTATGTTGCACCTGAAGTTCTTCATAGATCTTACAGTGTTGAAGCAGACTTATGGAGTATTGGGGTCATAGCATACATATTATTATGTGGAAGCAGACCATTCTGGGCACGCTCTGAGTCAGGAATCTTTCGGTCTGTGCTAAAAGCTACTCCTAACTTCAACGATTCGCCTTGGCCGTCTGTATCAGCGGAGGCTAAAGACTTTGTAAAGAGACTTTTGAACAAGGATCCCAGGAAAAGGATGACTGCTTCCCAGGCATTAACACACCCGTGGTTGAGAAATGAAAATCAAGACATTCCATTAGACATTTTAATCTACATGCAAGTCAAGTCATATTTGCAAGCCACACCTTTGAGGCGTGCAGGGCTCAAGGCTCTCTCTAAAGCATTGACAGAAGATGAGCTTATCTACCTCAGAGCACAGTTTAGCCTCTTGGAACCAAAAAATGGCTGCGTGTCCCTGGACAACTTTAGAGCCGCTCTAATAAAAAATGCAACTGATATTATGAAGGAAGCCAAGGTCCCGGACATTTTAAACGTGATGGATTCACCTGCTGCCTCCATAAAAATGGACTTCGAAGAGTTTTGTGCTGCTGCAATAAGTGTATACCAGCTTGAGGTTCATGAAGAGTGGGACAAAATCTCAAAGACAGCATTTGAGCATTTCGAACAGGCAGGAAACGTAGTACTTTCAGTAGAGGAGTTAAAAAAGGAGATGAATCTGGGTGCTGCATTTTGTTCTTTACCGGCCAATTGGATCAGAGAATCTGATGGGAAACTCAGCTTTGTTGGATACACAAAGTTTTTGCACGGCATCACTATTCGCAGTTCAAATACAAGACAGAGACAGAATGTTGCGTGA 1743 0.4515 MGHCCSKNLAAVDNETSQPDSNNKPPHSSSSVSGVTDGRNSYANSSPFNSPLPPSPGGTPGRKFRWPLPPPSPVKPIMTAILKRQGKSQPKEGSIPEEQGESTPCGERPLDKSFGYAKNIGAKYELGKEVGRGHFGHTHLAKAKKGVLKGQSVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHKNVAKFHDAFEDANNVYIVMELCDGGELLDRILSRGGRYTEADAKAIIVQALNVMAYCHLQGVVHRDLKPENFLFVSKDDDAPMKVIDFGLSDFMRPDQRLTDVVGSAYYVAPEVLHRSYSVEADLWSIGVIAYILLCGSRPFWARSESGIFRSVLKATPNFNDSPWPSVSAEAKDFVKRLLNKDPRKRMTASQALTHPWLRNENQDIPLDILIYMQVKSYLQATPLRRAGLKALSKALTEDELIYLRAQFSLLEPKNGCVSLDNFRAALIKNATDIMKEAKVPDILNVMDSPAASIKMDFEEFCAAAISVYQLEVHEEWDKISKTAFEHFEQAGNVVLSVEELKKEMNLGAAFCSLPANWIRESDGKLSFVGYTKFLHGITIRSSNTRQRQNVA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0170 580 ProSitePatterns Protein kinases ATP-binding region signature. 130 156 IPR017441 GO:0005524
Mibi05g0170 580 FunFam Calcium-dependent protein kinase SK5 296 391 - -
Mibi05g0170 580 Pfam Protein kinase domain 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0170 580 Gene3D - 425 494 - -
Mibi05g0170 580 ProSiteProfiles Protein kinase domain profile. 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0170 580 MobiDBLite consensus disorder prediction 49 76 - -
Mibi05g0170 580 SMART serkin_6 124 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0170 580 Gene3D - 406 536 - -
Mibi05g0170 580 CDD STKc_CAMK 123 385 - -
Mibi05g0170 580 Gene3D Phosphorylase Kinase; domain 1 117 213 - -
Mibi05g0170 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Mibi05g0170 580 MobiDBLite consensus disorder prediction 10 48 - -
Mibi05g0170 580 FunFam CDPK-related kinase 3 116 288 - -
Mibi05g0170 580 Gene3D Transferase(Phosphotransferase) domain 1 214 405 - -
Mibi05g0170 580 PANTHER SERINE/THREONINE-PROTEIN KINASE 108 547 - -
Mibi05g0170 580 SUPERFAMILY EF-hand 419 564 IPR011992 -
Mibi05g0170 580 SUPERFAMILY Protein kinase-like (PK-like) 123 410 IPR011009 -
Mibi05g0170 580 FunFam CDPK-related kinase 1 117 212 - -
Mibi05g0170 580 MobiDBLite consensus disorder prediction 1 110 - -
Mibi05g0170 580 FunFam CDPK-related kinase 1 422 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0170 Mibi-ChrMibi05 1741160 1744630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0170 42 570 EF-hand Containing Proteins AT3G50530 57.143 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi05g0170 Pkinase 2.6e-70 CL0016