Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0166 ATGGGTGAATTTGGCGTTTGGGACAAGGAAGGTGCAAAAAACAGCAGCAATAGTGGAGTTGGGTTGGGTATGAAGGTGCAGAGGCAGAACCTTGAAGCATTCCCTAGTAAGAGCAAGATGATGATGGTTCCCCCTCCTCATAATCATCATCACCATCCTCCACTATATGGTCCCTCCTTTGCTTCTGCTTGTGATGGTGATGGTCCTACAACTTGTAAGTCCCTGACTAATCATACAAACCATTTTGTTAATGCTGCTTCTGCTTCTTCTGGTGCTGCCCTTGTTAGACCCTTGCAGCCTTTTCACATTTCTGCTTCAACCGCCTTCAAATCTTCAGGAGGGATGATGGCAGCTTCACTGGGATTTCCTTTCACAAAAGCACAATGCAAGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTATTCCTGTTCCTCCTCATCTGCTTATCCCTGTGCCTTCTTCTCGCTCTCCCTCGGAAACCGGTTTCAATCTAAGGTTTACAAGCAGTAATGATGCAGAGCCAGGTAGGTGCAGAAGAACAGATGGGAAAAAATGGAGATGTTCAAGAGATGTAGCACCTAACCACAAGTATTGCGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCATGTGGAAATTCAAGCCACCACCAACATTAATCAGCAAATGAACAGAACTAGCCAAGATTTTCCTTCTTTATCTACTCCCACCATGACTATCTCAAACTCCACAATCCGGAAGAATGGATCTTCCTCTCCGTTCCTTGTGCCTGCCAGTACCTGCCAGCCATACTTTGAATCTTCCCTTTCTCTTGATAAGCTCGGCGTCAAAGCTGCAAATTTTGATTCCCTTGCTTCTGTTCCAAGAGGCGTGGACTGGATGCTGAAAGGAGACCCTAATCCCATGGATTCGCAATGGCATCCTCTGTTACAGAACAAACTCCAATTGAATATGGGACGTTCCTGTAACAAGGACGCCTCAAATTCAATCACTCGTTCCAAAGGCCCTCTGTATACAAATCCGTACGAAGTTTTCAGCTCAGAACGAGACCAACAGAACAAGCGCCCCCCTTTGTACCTAAATCCACTAGCAGTTCCTATAGAGAATCCTCGCTCTGTAAAACCAAAAGCTTCCGTTGATGCTTGGTCGAGTGCAGAAATGAACGCCAACAAAAGGATCTCTTCTGCATCAAACAAGAAGTTATTATCACTTTCTTCTCTTGATTTGTCGGTAGGTGGTGGTACGGAGGAAGCCATAGGAGCTGTTCATATGGGCTTGGGCCAAATGGATCCACCCACGAATTGGGCCTCGTGTTCAACTCCTGGGGGCCCACTTGGGGAAGTGTTGAGGCCCAGTAAGGTGGCAACCACAACCAGTGAGAGCCCAATGGCAACAATGACGCCATCTCCATCAGGGGTGTTGCAGAAGACGCTTGCATCATTTTCTGATAGTAGCAGCCCGAGGCCAAGGATTGGGTCTTCAAGGGCCGCTTCTGAAATGGCTATGCTTTGCTTTAATCATGCCAAGCCACCTCCTTAA 1560 0.4699 MGEFGVWDKEGAKNSSNSGVGLGMKVQRQNLEAFPSKSKMMMVPPPHNHHHHPPLYGPSFASACDGDGPTTCKSLTNHTNHFVNAASASSGAALVRPLQPFHISASTAFKSSGGMMAASLGFPFTKAQCKELERQAMIYKYMMASIPVPPHLLIPVPSSRSPSETGFNLRFTSSNDAEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKHVEIQATTNINQQMNRTSQDFPSLSTPTMTISNSTIRKNGSSSPFLVPASTCQPYFESSLSLDKLGVKAANFDSLASVPRGVDWMLKGDPNPMDSQWHPLLQNKLQLNMGRSCNKDASNSITRSKGPLYTNPYEVFSSERDQQNKRPPLYLNPLAVPIENPRSVKPKASVDAWSSAEMNANKRISSASNKKLLSLSSLDLSVGGGTEEAIGAVHMGLGQMDPPTNWASCSTPGGPLGEVLRPSKVATTTSESPMATMTPSPSGVLQKTLASFSDSSSPRPRIGSSRAASEMAMLCFNHAKPPP 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0166 519 SMART QLQ_2 122 158 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi05g0166 519 MobiDBLite consensus disorder prediction 165 186 - -
Mibi05g0166 519 Pfam QLQ 123 156 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi05g0166 519 ProSiteProfiles WRC domain profile. 176 220 IPR014977 -
Mibi05g0166 519 ProSiteProfiles QLQ domain profile. 123 158 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi05g0166 519 Pfam WRC 177 219 IPR014977 -
Mibi05g0166 519 MobiDBLite consensus disorder prediction 1 22 - -
Mibi05g0166 519 PANTHER GROWTH-REGULATING FACTOR 5 104 379 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0166 Mibi-ChrMibi05 1721800 1724413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0166 348 493 GRF Transcription Factor Family AT5G53660 30.556 7.77e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mibi05g0166 WRC 2.5e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0166 05 1721800 1724413 Mibi05g0166 05 1721800 1724413 ECH