Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0156 ATGGGTGATTTGAAAGTAGTGGAAGCGATGGTGAGTGAGAAGGAGAAGGAGAAGGAGAGAACAGAGGAGGAGGAGGATGAAAGTGGAATAGAGAGCAAAGGGGCAGAATTGAATGGTCTGATGAGGTGGGAAAAATTCTTGCCCAAGATGGTATTGAGGGTTCTCTTGGTTGAAGCTGATGATTCTACCCGCCAGATTATTGCTGCGCTTCTCAGAAAATGCAGCTACAGAGTGGCTGCTGTTCCTGATGGCCTGAAAGCTTGGGAAATACTCAAGGGAAGATCACACAATATCGATCTAATACTGACAGAAGTAGATTTACCTTCCATATCTGGCTATGCGCTTCTCACCTTAATCATGGAGCATGAGATTTGCAAAACCATTCCTGTTATAATGATGTCCTCACAAGATTCGATTAGCACAGTATACAAGTGCATGTTGAAAGGTGCTGCTGACTATCTTGTTAAGCCCATTAGAAAAAATGAGTTGAGGAATTTGTGGCAGCATGTCTGGAGAAGGAGATCGTCAATAATCGGTTTAAATGGTCTTCAAGATGAGAGTGTTGCGCAACAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGTCGTTCAAGTGGAGATGCTGCATGCATTCAAAAAAATAAGGAATTGATTGAGAAAGGGAGTGATGCTCAGAGCTCCTGTACAAAGCCTGATTTGGAAGCTGAAAGTGCCCCTATGGAAAATGTTGAGGAATTCGCTCATCTTAGATGTGGTGAATCGTATCCGAGTGATGAAAAGATTCAGGAGGTTGAAGCTAGTATTCATTTAGGTCACACATTGATTGTACATGATAATCATGCTGGAGGATCAAATGTGGGTAAGACGAGCACAACTCATTGCACGAATGGCTGTCCAGATGATAGGAGTGCTAGTATCAGTGTTGAAGCTCATGATAATCCATATGTCCAAATGAACTCCTCCAAGGAAGCCATTGACTTGATTGGAGCATTTCATGCTCATTCAAAATGCAGTCCCAAAAGTTCCACAGTCAATTACACGGGCATGTTTGAATTCTCTCCACAGTTAGATCTTTCATTGAGAAGAGATCCTCCCAGCAGCTTTGAGAATGAAGTCTCAAAAGATAAGCAAGCCCTCACACATTCCAATGCCTCAGCTTTCAAACGGTATACCAGCCGACAATCGCAAGCGCCACCAGCAGTTTTTATTAGCTTTTGTGGTCTAGATAGCTTACAGAGAACAAATTGTGAGAAAAATAACACTTATGTTGCTACTGACTGTAACTCAGATAGCTCAACACCGAGTATGCAAAGAAGTATCATGTCACCCATGACTTCCCATTCCAGAGAATCTAAACTCGCATCTTCATTCTCCCATCCACCGCGTTCTCTCCCAATTCCAGTAAGAGGAATAAGATTCAACGACCTATGCAAAACCTATGGCTCTTTCCCTCCTCCAATGTTTTGTACACAGTCAGATCCACCATCAAAGCCAAGTCCAAGATCTGCCGTGCACCTGGAATCTACTGTTCAAGAAAATGCATATTGTCAGCCTAATGTCAGAGAAAATATTTCGGAGCAGAATTATGAAGCTCGAGATCAAAGTGGAAACAACCTTGCAAGCCACGTTGTTTATGTGCAGGATGATCTCAAGTTGGAACATGTGGAAGATCGAGGACACATTTCTCCTGCAACTGATCAGAGTGGAAGCAGTAGTTTCTGCAATAATGGAAATTTGAGTCGCATGAACAGCATTGGCTATGGTAGCAACTGTGGAAGTAATAGCAACGTTGATCAGGCTGTCATAGTGAGGACTGCTTCAGAGGTGAAGAATTACGAAGACCTCACAAATAATGCAAGTTCTCATCGATCCTTCCAAAGAGAAGCAGCTCTAAATAAGTTCCGTTTGAAAAGGAAAGAGAGATGTTATGAGAAGAAGGTCCTCTACTATTAG 1956 0.4259 MGDLKVVEAMVSEKEKEKERTEEEEDESGIESKGAELNGLMRWEKFLPKMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEILKGRSHNIDLILTEVDLPSISGYALLTLIMEHEICKTIPVIMMSSQDSISTVYKCMLKGAADYLVKPIRKNELRNLWQHVWRRRSSIIGLNGLQDESVAQQKVEATAENNAASRSSGDAACIQKNKELIEKGSDAQSSCTKPDLEAESAPMENVEEFAHLRCGESYPSDEKIQEVEASIHLGHTLIVHDNHAGGSNVGKTSTTHCTNGCPDDRSASISVEAHDNPYVQMNSSKEAIDLIGAFHAHSKCSPKSSTVNYTGMFEFSPQLDLSLRRDPPSSFENEVSKDKQALTHSNASAFKRYTSRQSQAPPAVFISFCGLDSLQRTNCEKNNTYVATDCNSDSSTPSMQRSIMSPMTSHSRESKLASSFSHPPRSLPIPVRGIRFNDLCKTYGSFPPPMFCTQSDPPSKPSPRSAVHLESTVQENAYCQPNVRENISEQNYEARDQSGNNLASHVVYVQDDLKLEHVEDRGHISPATDQSGSSSFCNNGNLSRMNSIGYGSNCGSNSNVDQAVIVRTASEVKNYEDLTNNASSHRSFQREAALNKFRLKRKERCYEKKVLYY 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0156 651 PANTHER TWO-COMPONENT RESPONSE REGULATOR 52 199 IPR045279 GO:0009736
Mibi05g0156 651 MobiDBLite consensus disorder prediction 428 459 - -
Mibi05g0156 651 CDD psREC_PRR 54 157 - -
Mibi05g0156 651 Gene3D - 50 267 - -
Mibi05g0156 651 MobiDBLite consensus disorder prediction 11 31 - -
Mibi05g0156 651 ProSiteProfiles Response regulatory domain profile. 53 171 IPR001789 GO:0000160
Mibi05g0156 651 SMART REC_2 52 167 IPR001789 GO:0000160
Mibi05g0156 651 Pfam Response regulator receiver domain 54 165 IPR001789 GO:0000160
Mibi05g0156 651 Coils Coil 4 31 - -
Mibi05g0156 651 MobiDBLite consensus disorder prediction 428 461 - -
Mibi05g0156 651 SUPERFAMILY CheY-like 52 184 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0156 Mibi-ChrMibi05 1650302 1654177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0156 623 650 Response Regulator Gene Family AT5G24470 75.000 1.08e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi05g0156 Response_reg 1.3e-21 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0156 05 1650302 1654177 Mibi05g0156 05 1650302 1654177 ECH