Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0153 ATGGCCTTCTCTTCCACCCCTTCTATTTCTTCATCTCTCCAACGAATCGCAGTCGGTAGCTTCATTGAAGATTACAACAACCGAGTCGATATTATCTCATTCAACGCTGATTCTCCCTCCCTTCGTCACCAACCTTCCCTCTCTTTTGACCATCCCTACCCTCCCACCAAACTCATGTTCCACCCCAACGCTCACTCTTCTCTTCGTAAGTCCTCCTCCGATCTCCTCGCAACTTCCGGTGACTACCTTCGCCTCTGGGAGGTTCGTGAAAACTCCGTCGACGCGATTTCGCTTCTTAACAATAGCAAGACCAGCGAGTTCTGTGCCCCTTTGACCTCCTTCGATTGGAACGACATAGAGCCCAAGAGAATCGGGACCTCCAGCATCGATACCACCTGTACGATTTGGGATATCGAAAAGGGGGTTGTTGAAACGCAGTTAATTGCGCATGATAAGGAGGTTTATGACATTGCTTGGGGTGAGGCTAGAGTTTTTGCTTCTGTTTCTGCGGATGGTTCTGTTAGGATCTTCGATCTGAGGGACAAGGAGCATTCCACGATTATATACGAGAGTCCACAGCCTGATACGCCTCTGCTTAGGTTGGCTTGGAATAAGCAGGACCTGAGGTATATGGCCACTATATTGATGGATAGCAATAAGATTGTGATATTGGATATTAGATCGCCGACCATGCCTGTGGCTGAGTTGGAGAGGCATCGTGCTTGTGTGAATGCCATTGCTTGGGCTCCGCAGAGTTCTAGGCATATTTGTTCTGCTGGGGATGATTCGCAGGCCCTTATTTGGGAATTGCCTACTGTGGCTGGACCTAATGGGATTGATCCCATGTCTATGTATTCTGCTGGCTCCGAAATTAATCAGCTCCAATGGTTTGAGATTTCCTCATGA 906 0.4834 MAFSSTPSISSSLQRIAVGSFIEDYNNRVDIISFNADSPSLRHQPSLSFDHPYPPTKLMFHPNAHSSLRKSSSDLLATSGDYLRLWEVRENSVDAISLLNNSKTSEFCAPLTSFDWNDIEPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKIVILDIRSPTMPVAELERHRACVNAIAWAPQSSRHICSAGDDSQALIWELPTVAGPNGIDPMSMYSAGSEINQLQWFEISS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0153 301 ProSitePatterns Trp-Asp (WD) repeats signature. 256 270 IPR019775 -
Mibi05g0153 301 ProSiteProfiles Trp-Asp (WD) repeats profile. 147 187 IPR001680 GO:0005515
Mibi05g0153 301 Gene3D - 13 301 IPR015943 GO:0005515
Mibi05g0153 301 PANTHER WD REPEAT CONTAINING PROTEIN 1 297 IPR045159 -
Mibi05g0153 301 SUPERFAMILY WD40 repeat-like 7 272 IPR036322 GO:0005515
Mibi05g0153 301 ProSiteProfiles Trp-Asp (WD) repeats profile. 236 270 IPR001680 GO:0005515
Mibi05g0153 301 SMART WD40_4 229 269 IPR001680 GO:0005515
Mibi05g0153 301 SMART WD40_4 42 87 IPR001680 GO:0005515
Mibi05g0153 301 SMART WD40_4 100 137 IPR001680 GO:0005515
Mibi05g0153 301 SMART WD40_4 140 178 IPR001680 GO:0005515
Mibi05g0153 301 Pfam WD domain, G-beta repeat 147 178 IPR001680 GO:0005515
Mibi05g0153 301 Pfam WD domain, G-beta repeat 233 268 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0153 Mibi-ChrMibi05 1634584 1636957 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2250 08 40218333 40219370 Mibi05g0153 05 1634584 1636957 CCT
Mibi05g0153 05 1634584 1636957 Mibi05g0153 05 1634584 1636957 ECH