Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0145 ATGGCCATCGAGTGTTGTCCGCCGAGCGATGATGAGGTGGCGGTTTTGCCTCTGAATTCGCTTCCTTTAGGTTTCAGGTTTCGGCCTACTGATGAGGAGTTGATTGATTATTATCTGCGACAGAAGATCAACGGAAATGGGGGTGACGTATGGGTTATTCGAGAAATTGATGTTTGCAAATGGGAGCCTTGGGATTTGCCTGATTTATCGGTTGTACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGCAAATATCCAAATGGGCATCGATTGAACCGAGCAACGGCTCATGGGTACTGGAAGGCAACGGGCAAAGATCGCAAAATTAAGTCCGGTTCGATCGTGATTGGAATGAAGAAGACTTTAGTGTTCTATATTGGTCGTGCACCCAGAGGGAAAAGGACCTATTGGGTTATGCATGAGTACCGTCCTACCCTGAAGGAGCTCGATGGTACCAATCCTGGACAGAGTGCATATGTACTTTGCCGTTTATTTAAGAAGCAAGATGAGACTCTTGAAGGTTCAAACTTTGAGGGAAATGATCAGACTGTGTCAACTCTTACTACTGCTAATTACTCTCCTGAAGAAATACAATCAGGCACGGTTCCAGTGGCAGCATCTCCGTCCCTGGTTACTGAAGATGATAAGAACAAAGCAGTTCCATTCTCTATCTCTGAAGGTTCTGAGGAAGCCACATCCAACATTGTAACACCGTTTGATTGCAACAGTGAAGAATGCGATACTTTTGATGTACAAAATAAGATTGTTATTCCAACAACTGCAGAGGAAGATCAACTTCTGGACCTTGACATATTTTATGATTCACCAACTGAACCATTGGATGACAAACTCTTCTCCCCTGTACATCAGCATCTACCACCAGAATTTTGTTTTCCTTCAAGCAATGATGTGGATAATTGTGGGTTGCAACTTCAGTATGGCACAAATGAGATTAATGTGACAGAGTTTTTAAACTCAGTTGTCAACTGGGATGAGTTATCCTATGATTCCAGCAGTCAAAAGCCCACTTCCACCTTGGTTGATGCTAAGGATAATGGATCAGGCAGTGATTCAGACGTGGAAATGCCAAATATACTGAGTCTGCAAGCATTACGTGCCGTGAATCCTGGTGAGGCAATTGACCGTGGAGATGAAAAGAGCCATATGGGATTATTACAAAACAATCTTCCAATGGCCTCACCTGATGCTGGCATGGGCCAAGTGTACAACATGGACAATGGATCCAGGAATTATGATTCAGTTGGTAATGGTGATGTTGGCACTGGAATCAGGATAAGGTCTCGCCAAGTACGGAATGACAACACAAACCCCAACAGCCAGGGTACCGCACCCAGGAGAATCCGTCTGCAACGGAAACTTCAAGTGCACCCTCTTAGCTGTGATGAGGCGATCAAAGGGGGGAGCTGCTTAACAGAGGACCATGATTCAAAGCCACTTATTGCGGGGGAGACAAGAGCTTCAGAAAATAACGATGCTGATGTGAATGCCAAAGTTGTAGATGAACCCCAGAAGACATCTTCTGAGCCAACGGACGTTACAAAAATTCCTGAACAACATACTGCAAGTGCAGGGTCTCTTTTGAAGTCGAAAGACATCAAAACCTCGTGCACAATGGCCCGTTACACATCAGAAGTGTCCATCAAATTCATCTTCTGGTCATCTGTTGTAATTGTTATCATCGTACTGACCCTTCTATTGTTATTAGCTAACGTATGGGGTCACTCTCGAAGTTGA 1767 0.446 MAIECCPPSDDEVAVLPLNSLPLGFRFRPTDEELIDYYLRQKINGNGGDVWVIREIDVCKWEPWDLPDLSVVRNKDPEWFFFCPQDRKYPNGHRLNRATAHGYWKATGKDRKIKSGSIVIGMKKTLVFYIGRAPRGKRTYWVMHEYRPTLKELDGTNPGQSAYVLCRLFKKQDETLEGSNFEGNDQTVSTLTTANYSPEEIQSGTVPVAASPSLVTEDDKNKAVPFSISEGSEEATSNIVTPFDCNSEECDTFDVQNKIVIPTTAEEDQLLDLDIFYDSPTEPLDDKLFSPVHQHLPPEFCFPSSNDVDNCGLQLQYGTNEINVTEFLNSVVNWDELSYDSSSQKPTSTLVDAKDNGSGSDSDVEMPNILSLQALRAVNPGEAIDRGDEKSHMGLLQNNLPMASPDAGMGQVYNMDNGSRNYDSVGNGDVGTGIRIRSRQVRNDNTNPNSQGTAPRRIRLQRKLQVHPLSCDEAIKGGSCLTEDHDSKPLIAGETRASENNDADVNAKVVDEPQKTSSEPTDVTKIPEQHTASAGSLLKSKDIKTSCTMARYTSEVSIKFIFWSSVVIVIIVLTLLLLLANVWGHSRS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0145 588 Pfam No apical meristem (NAM) protein 22 147 IPR003441 GO:0003677|GO:0006355
Mibi05g0145 588 MobiDBLite consensus disorder prediction 424 458 - -
Mibi05g0145 588 SUPERFAMILY NAC domain 15 171 IPR036093 GO:0003677|GO:0006355
Mibi05g0145 588 MobiDBLite consensus disorder prediction 438 456 - -
Mibi05g0145 588 ProSiteProfiles NAC domain profile. 21 171 IPR003441 GO:0003677|GO:0006355
Mibi05g0145 588 FunFam Nac domain-containing protein 86 30 174 - -
Mibi05g0145 588 MobiDBLite consensus disorder prediction 341 362 - -
Mibi05g0145 588 Gene3D NAC domain 30 176 IPR036093 GO:0003677|GO:0006355
Mibi05g0145 588 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0145 Mibi-ChrMibi05 1570292 1573615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0145 13 483 NAC Transcription Factor Family AT4G35580 39.709 2.57e-94 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi05g0145 NAM 8.2e-35 No_clan