Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0104 ATGAGCGCTGTCTGCTGCCCCGACCATGTCTCAGGAAAAAAAGAGAGTATCATGAGAGAGCTGCTGGTTGAGGGTAAAGAGAGTGCTTCTCAGCTGAAGCTTTTGTTTCAAAAGCCTTTGACCCCTGATGATGTCACTACTCCCTCCCCCTCTGCTCAACAACTTGTGGCCAAAATTTTGAAATCCTTCACCCAAAGTATTTCCCTTCTCACTTCCTCCGTTGCCCAGATTTCGGCGATTTCCGGTCAGAGTGGGTCCCACCTCGGAGCTTATGGCCGGAGGGAGGACGATTCCGGCCAGAGCAGGAAGAGATCGCCGCCGCCGCCGCCTCCTCCTAAGGATCGGAGAGGCTGCTACAAAAGAAGGAAGGGAGAAAACACATGGACTGAAACCTCGCCCACCATGGAGGATGGTCATGCATGGAGAAAGTATGGACAAAAGGAGATCCTTAATTCTAAATTCCCCAGGAGTTACTTTAGATGCACAAGGAAGCAAGATCAAGGATGTAAAGCAATCAAACAGGTCCAGCGGTTGCAGGAGAATCCAGAAATGTTCAAAACAACCTACATTGGACTCCACACGTGCAAAGACAACCTCAAGGCTCCAGAAATGGTAACAGATTGTGGAAATTGGGGATCATACATGCTGCCCACCAAATCTAATCGTCCTCTGATGAGCTCATCATCATCAACGTTAACCCGGTCTCCAACCATAAAGCAGGAATATCCTAAGGAGGAGGAAACGTCACTGAGTGAAGTAACAGATGAATTGTGGTCAGAATTTAAGGACTTTGAGCTTTCGGAGCCCTTGATGAAGATGCCTTCCACTATGGATTTTGGAGTTGATCATTCTGTTGGTTTTGGCACTGATCATCATCTCCGCTTCCAGTATTGA 894 0.4799 MSAVCCPDHVSGKKESIMRELLVEGKESASQLKLLFQKPLTPDDVTTPSPSAQQLVAKILKSFTQSISLLTSSVAQISAISGQSGSHLGAYGRREDDSGQSRKRSPPPPPPPKDRRGCYKRRKGENTWTETSPTMEDGHAWRKYGQKEILNSKFPRSYFRCTRKQDQGCKAIKQVQRLQENPEMFKTTYIGLHTCKDNLKAPEMVTDCGNWGSYMLPTKSNRPLMSSSSSTLTRSPTIKQEYPKEEETSLSEVTDELWSEFKDFELSEPLMKMPSTMDFGVDHSVGFGTDHHLRFQY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0104 297 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 227 IPR044810 GO:0003700
Mibi05g0104 297 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0104 297 SUPERFAMILY WRKY DNA-binding domain 130 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g0104 297 MobiDBLite consensus disorder prediction 222 249 - -
Mibi05g0104 297 MobiDBLite consensus disorder prediction 222 238 - -
Mibi05g0104 297 MobiDBLite consensus disorder prediction 84 135 - -
Mibi05g0104 297 ProSiteProfiles WRKY domain profile. 130 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0104 297 Pfam WRKY DNA -binding domain 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0104 297 Gene3D WRKY domain 124 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g0104 297 MobiDBLite consensus disorder prediction 90 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0104 Mibi-ChrMibi05 1287787 1289536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0104 12 228 WRKY Transcription Factor Family AT3G56400 43.049 1.76e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi05g0104 WRKY 2.2e-25 CL0274