Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0101 ATGGCTTCCAGGACATCAGGCTCTTCTTCTTCGAATTGGATGTTGGAAAACGACGACGTTCCTCACGTTTTAGCGGTGGATGACAACCTCATCGATCGCAAACTTGTCGAGAAGCTTCTCAGGAATTCTTCTTGCAAAGTGACTACGGCAGAAAATGGGGCGAGGGCATTGGAATTCTTGGGTTTAGCAACTGATGATGAACACAATATCCAGAAGGGCACCGGTTCCAAAGTAAATTTGGTAATCACAGACTACTGTATGCCTGGGATGACAGGTTATGATCTACTGAAGAAGATCAAGGAATCATCTGTTATGAAGGAGGTGCCAGTGGTAATCATGTCATCTGAAAATGTGCCAACTCGGGTCACCAAATGTTTGGAGGAAGGAGCTCAAATGTTCATCCTCAAACCCCTTAAACAATCTGATGTTAATGTTCTGACGTGTCAATTGATGAACTGCGGGGGCTAA 468 0.4466 MASRTSGSSSSNWMLENDDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGARALEFLGLATDDEHNIQKGTGSKVNLVITDYCMPGMTGYDLLKKIKESSVMKEVPVVIMSSENVPTRVTKCLEEGAQMFILKPLKQSDVNVLTCQLMNCGG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0101 155 CDD REC_typeA_ARR 23 146 - -
Mibi05g0101 155 SUPERFAMILY CheY-like 21 146 IPR011006 -
Mibi05g0101 155 Pfam Response regulator receiver domain 23 142 IPR001789 GO:0000160
Mibi05g0101 155 SMART REC_2 21 147 IPR001789 GO:0000160
Mibi05g0101 155 ProSiteProfiles Response regulatory domain profile. 22 151 IPR001789 GO:0000160
Mibi05g0101 155 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 150 IPR045279 GO:0009736
Mibi05g0101 155 Gene3D - 22 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0101 Mibi-ChrMibi05 1274239 1275080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0101 7 153 Response Regulator Gene Family AT3G56380 64.474 2.06e-62 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi05g0101 Response_reg 7.3e-22 CL0304