Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0096 ATGTCTCTTCATCATCAACGAGCTCGCCGCCTTCTGCTGGACCATGATTCCGGGCCAACCCCACCAGAAAGCATATACAGGACGAGGATGACTTATACAAGCGACGCTAATTTTGACACCAACATGGTGATTATATTAGCAGCCCTGCTCTGTGCACTAATATGTGCTTTGGGTCTGAATTCAATAGTAAGATGCGCTCTCAGATGCAGCCGAAGGTTGGCTTTTGAGACAGCAGAGGAGGCTGCGGCTCGTTTGGCAGCAAAAGGACTAAAGAAGAGTGCTTTGCGTCAGATACCTATAGCTGTGTGTGGTTCTTCAGGAGCTGAAATTGCTGGCACTGATTGTCCAATTTGCTTGGGGGAGTTCATGGACGGAGAGAAAGTGAGAGTGCTTCCAAAATGCAGCCATGGATTCCATGTAAAGTGCATAGACACGTGGCTGCTTTCTCATTCCTCCTGTCCTACTTGCAGGCAGTCTCTCCACGAACCCACCATTCCTAAGGCTGTATCAGTACCAGCTGATCAGGCTGTTGAAGAAAGAGTTAGGCTCTGGCTAACGGCTGCTAAGAACTTGACCAGGCGATGCATGCTCCACCTTCAGAATTCACCCAGTAAGAGGAAGGTTGATTGA 630 0.4889 MSLHHQRARRLLLDHDSGPTPPESIYRTRMTYTSDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETAEEAAARLAAKGLKKSALRQIPIAVCGSSGAEIAGTDCPICLGEFMDGEKVRVLPKCSHGFHVKCIDTWLLSHSSCPTCRQSLHEPTIPKAVSVPADQAVEERVRLWLTAAKNLTRRCMLHLQNSPSKRKVD 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0096 209 SUPERFAMILY RING/U-box 112 163 - -
Mibi05g0096 209 SMART FANCL_C_2 111 174 - -
Mibi05g0096 209 Pfam Ring finger domain 114 157 IPR001841 -
Mibi05g0096 209 PANTHER RING-H2 FINGER PROTEIN ATL78 7 174 IPR044602 GO:0016567|GO:0016740
Mibi05g0096 209 ProSiteProfiles Zinc finger RING-type profile. 115 157 IPR001841 -
Mibi05g0096 209 CDD RING-H2_PA-TM-RING 114 157 - -
Mibi05g0096 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 164 IPR013083 -
Mibi05g0096 209 SMART ring_2 115 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0096 Mibi-ChrMibi05 1255026 1255757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0096 34 170 C3H Transcription Factor Family AT3G10910 63.265 2.74e-56 175