Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0090 ATGATCATTTCACTTCATGATATTAATCTGACATCCGCGGTGAGGAACGCACATGAGGAAGAAGCAAAGATGAGCACTGTTGGTAATATTGGCTTTCCTTCACAATTAAGAGCATCTCTCGACATTGTTCGGGCTTCAAAGCAGCGGAAGAAGAAAAGTGCATGGAGTTTTATGGCTCAGGATTGTCCCATCAGGTTGCATAATCAAATCTCCTGCAAACTACCAGACAGTGGGATTGAGGAGAACCCCACAAGCAGGAGGGCCTCTAATTCCAAGAACAGGATGGAGGAGTACAATATAGCTATGAGGAATATGATGAGGAACCCTTATGAGTATCATCATGACCTGGGTATGAATTACACACTTATAACTGATAGCTTGATTGTGGGCTCCCAGCCACAAAAACCTGAAGATATAGATCACCTCAAAAAGGAAGAGAATGTAGCATACATTTTGAACTTGCAACAGGACAAGGATGTGGAGTATTGGGGAATAGACTTAAAATCTATCATAAGAAGATGCCGCAAACTCGGCATTCGTCACATGAGGAGGCCTGCGATAGACTTCGATCCAAACTCCTTGAGAAATGAGCTGCCAAAAGCAGTTTCATCACTGGAATGGGCTGTTTCTGAGGGAAAAGGAAGAGTGTATGTGCATTGCACAGCTGGACTTGGAAGAGCTCCGGCAGTGGCAATTGCTTACTTGTTCTGGTTCTGTGACATGAATCTAAATGCAGCATATGATATGTTGACAGCAAAGAGACCTTGTGGACCCAATAAAAGAGCAATACGGGGGGCTACGTATGATTTGGCAAAAAATGATCCGTGGAAAGAGCCATTCGAGAGTCTTCCAGAACATGCATTTGAGGATGTAGCTGACTGGGAGAGGGATCTAATTAAAAATCGAGTCCGTTCTCTTCGTGGAACTTGA 930 0.4376 MIISLHDINLTSAVRNAHEEEAKMSTVGNIGFPSQLRASLDIVRASKQRKKKSAWSFMAQDCPIRLHNQISCKLPDSGIEENPTSRRASNSKNRMEEYNIAMRNMMRNPYEYHHDLGMNYTLITDSLIVGSQPQKPEDIDHLKKEENVAYILNLQQDKDVEYWGIDLKSIIRRCRKLGIRHMRRPAIDFDPNSLRNELPKAVSSLEWAVSEGKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNAAYDMLTAKRPCGPNKRAIRGATYDLAKNDPWKEPFESLPEHAFEDVADWERDLIKNRVRSLRGT 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0090 309 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 196 255 IPR000387 GO:0016311|GO:0016791
Mibi05g0090 309 ProSiteProfiles Dual specificity protein phosphatase domain profile. 119 276 IPR020422 GO:0006470|GO:0008138
Mibi05g0090 309 Gene3D Protein tyrosine phosphatase superfamily 102 309 IPR029021 -
Mibi05g0090 309 Pfam Dual specificity phosphatase, catalytic domain 140 259 IPR000340 GO:0008138|GO:0016311
Mibi05g0090 309 CDD DSP_laforin-like 118 265 IPR045204 GO:0019203|GO:0046838
Mibi05g0090 309 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 60 278 - -
Mibi05g0090 309 Coils Coil 88 108 - -
Mibi05g0090 309 SMART dsp_5 119 269 IPR020422 GO:0006470|GO:0008138
Mibi05g0090 309 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 102 309 - -
Mibi05g0090 309 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 111 261 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0090 Mibi-ChrMibi05 1214844 1216737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0090 40 309 Protein tyrosine phosphatase (PTP) family AT3G10940 71.014 1.18e-147 414