Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0068 ATGGGTGCTTATGTTCAAGGTTCTAACATCACTTCTTTGCCATTGGAATCTTCTAGGAAAAGGAAAAGTCGTAGTAGGCGGGATGGCTCTAAATCTGTGGCTGAGACTCTGGCAAAGTGGAAAGAATATAATGAACACATTGAATCTAGCAAAGTCGGGAGCAAATCAACTCGCAGGGCCCCGGCCAAAGGTTCAAAGAAAGGATGTATGAAGGGTAAAGGAGGGCCTGATAACTCAAGATGTAATTACAGGGGCGTTAGACAAAGAACCTGGGGAAAATGGGTTGCTGAGATCAGGGAACCAAACAGGGGAAGTAGGTTGTGGTTGGGTACATTCGGTACTGCATATGAAGCTGCCCTTGCTTATGATGAAGCTGCTAGAGCCATGTATGGTCCTTGTGCCCGCCTCAATTTTCCCAACATATCAGATTATACTTCTTGCAAGGAATTCCTCAATGGCACTTCACCGGCCACAACTTTTTCAGGTTCTTCAGTGGCAACTCCTGCTGGTTCGGACACAACAACCATATCAAATCATTCTGAGGTCTGTGCGGCTGAGGATGTTAAGACAAGACATGAACCTACCAAAATAAGTGACATGGCTAGTGTTCATCTTGAAGCTGATGAAGTTGCCTCTGAAGATATCAAAGTGAAGTCGGAACCAAAGGTTGAGCCTCTCGATCTCACAGATCAAGAGCGCAGGGGCTATCAAATTGTGAAACCTCAAGAACATGAGATCAAAAAGGACGAAAATGGTGAAAGTAGAGATCAAATGGACTATTCTTGGCTCGAGGGTGATGATCCGGAAGGTGATTACTTGCAGAATTTCTCTATGGATGAGATGTTTGATGTGGATGAACTTTTGGGGGCAATGGACAAGAATCCGATTGGTGACTATGAAACGTTCAATTATGGACAGATGGGCCACGCTGGAGATGGAAACCTTAAGAGTGAAATGCCAGCAAGCTTTTCCTATGAACTCGAAAACCCAGATGCCAAGCTGCTGGGAAGTCTGCACCACATGGAACAGATACCATCAGATGTTGATTATGGATTTGATTTTTTGAAGATGGAGGGGCCAGAGAACAATAATGGTAGAGGGGATGAACAGGATGAACATCAATTTCTTGATTTCGGACTGCCAGACCTGTGA 1152 0.447 MGAYVQGSNITSLPLESSRKRKSRSRRDGSKSVAETLAKWKEYNEHIESSKVGSKSTRRAPAKGSKKGCMKGKGGPDNSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFGTAYEAALAYDEAARAMYGPCARLNFPNISDYTSCKEFLNGTSPATTFSGSSVATPAGSDTTTISNHSEVCAAEDVKTRHEPTKISDMASVHLEADEVASEDIKVKSEPKVEPLDLTDQERRGYQIVKPQEHEIKKDENGESRDQMDYSWLEGDDPEGDYLQNFSMDEMFDVDELLGAMDKNPIGDYETFNYGQMGHAGDGNLKSEMPASFSYELENPDAKLLGSLHHMEQIPSDVDYGFDFLKMEGPENNNGRGDEQDEHQFLDFGLPDL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0068 383 SUPERFAMILY DNA-binding domain 82 139 IPR016177 GO:0003677
Mibi05g0068 383 MobiDBLite consensus disorder prediction 362 383 - -
Mibi05g0068 383 FunFam Ethylene-responsive transcription factor 2 81 140 - -
Mibi05g0068 383 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Mibi05g0068 383 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Mibi05g0068 383 MobiDBLite consensus disorder prediction 17 34 - -
Mibi05g0068 383 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Mibi05g0068 383 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 18 354 - -
Mibi05g0068 383 CDD AP2 81 140 IPR001471 GO:0003700|GO:0006355
Mibi05g0068 383 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Mibi05g0068 383 MobiDBLite consensus disorder prediction 1 34 - -
Mibi05g0068 383 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Mibi05g0068 383 MobiDBLite consensus disorder prediction 48 77 - -
Mibi05g0068 383 MobiDBLite consensus disorder prediction 1 16 - -
Mibi05g0068 383 MobiDBLite consensus disorder prediction 360 383 - -
Mibi05g0068 383 Gene3D AP2/ERF domain 82 140 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0068 Mibi-ChrMibi05 1081039 1082190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0068 5 383 AP2-EREBP Transcription Factor Family AT2G40340 39.695 2.63e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi05g0068 AP2 1.4e-15 CL0081