Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0053 ATGGAAGACCACCACCGCCTCTCCCAACAAGAAGGCAGCACCGCCACGACCGCCACCGGCACCAGTGCGAGGCCTCCATCTCCAAATAACACCAAATCGCGCAAGTGCAAAGGGAAAGGGAAAGGTGGTCCCGACAACAACAAATTTAGGTACCGTGGCGTTAGGCAGCGCAGCTGGGGCAAATGGGTCGCTGAGATCCGTGAGCCCCGCAAGCGTACCCGCAAGTGGCTCGGCACTTTCTCCACCGCCGAGGACGCCGCCCGTGCCTACGACCGCGCCGCCCTCATCCTCTACGGCTCCAGGGCCCAGCTCAACCTCCAGCCCTCCTCCTCCTCCGCCCCCTCCTCCTCCGCCGCCCCCTCCTCCTCCTCCTCCTCCTCCCACACCACCCTCCGCCCCCTCCTCCCCCGCCCCTCCTTCTCCCCCGGCTTCTTCCCCTACGGGTTTCACAATAATACCGATTATATCCCTCAGATGATGATGTGCCCTTTAGTCAATAATAATAATAATAATGCCATGGTGCAGCAGCATCATCGTCATCATCAGGTGGTGCAACTTCCCCCTCAGAAACCCTATCACCCTCAGTCGCCTCAATGTGATGCAAATATTATTGTGGAGAGCTCCCACAATGGAATATTGTACCAGGATCAGCCTCAGCAACCTCAGCCTCAGCCTCAGAATTCTTGCATGCACGATGATATTGGTTCTCTGGTGGGTTCTGTCGGGTCCACTTTGTTTGCTTCGCAGGCGCACACTGTGCTTGCACCCGCGGATCCCTGGCCCTTCACCACCGACGACGACTATCCGCCTAGTCTATGGGACTACTATAACGATCCTTACCTCTTTGATTTTTGA 855 0.5731 MEDHHRLSQQEGSTATTATGTSARPPSPNNTKSRKCKGKGKGGPDNNKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFSTAEDAARAYDRAALILYGSRAQLNLQPSSSSAPSSSAAPSSSSSSSHTTLRPLLPRPSFSPGFFPYGFHNNTDYIPQMMMCPLVNNNNNNAMVQQHHRHHQVVQLPPQKPYHPQSPQCDANIIVESSHNGILYQDQPQQPQPQPQNSCMHDDIGSLVGSVGSTLFASQAHTVLAPADPWPFTTDDDYPPSLWDYYNDPYLFDF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0053 284 Pfam AP2 domain 50 99 IPR001471 GO:0003700|GO:0006355
Mibi05g0053 284 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Mibi05g0053 284 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Mibi05g0053 284 FunFam Ethylene-responsive transcription factor 2 50 108 - -
Mibi05g0053 284 MobiDBLite consensus disorder prediction 1 52 - -
Mibi05g0053 284 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Mibi05g0053 284 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 17 248 - -
Mibi05g0053 284 MobiDBLite consensus disorder prediction 106 134 - -
Mibi05g0053 284 CDD AP2 50 107 IPR001471 GO:0003700|GO:0006355
Mibi05g0053 284 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Mibi05g0053 284 MobiDBLite consensus disorder prediction 38 52 - -
Mibi05g0053 284 MobiDBLite consensus disorder prediction 10 33 - -
Mibi05g0053 284 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Mibi05g0053 284 SUPERFAMILY DNA-binding domain 50 108 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0053 Mibi-ChrMibi05 936661 937515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0053 37 284 AP2-EREBP Transcription Factor Family AT2G40220 44.637 3.20e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi05g0053 AP2 7.9e-13 CL0081