Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0052 ATGATGAAGTTGGGAACTGGGGCAGATAGGGATGTACAGTCCAGAGTTTCAATGCAACCATGTCTGGGATGTGTAATGTTCCCAAAGAGAGAGTGGGGCATCGCCGCCGCCGCCATGACAAGCCAGGATTCGCAGGGTTTTACGTGGCACTACACGGAGCTGGATGACCGAAATCTGGAAATCCGAGGCCGTACATTTTTCTTCGTGGTCGTCCTCTTCTCCATCATCCTTATTCTCATCCTTCTCTTCCTCTATGCTCGCTGGATCTGGAGGTACCGTGCCCAACGTCCCTCCGACGGACCCATCCTCGCCCCGCCGCCTCCGCCGCCGGGCCTCGACCCCTCTTCCATCAAGAATCTGCCTATGGTTTTGTACCACAGGACTTCGGCTTCCAACAGTAAGTTGGAGGAAACAGAGTGCTGTATTTGCCTCGGCACGTTCAACGATGGGGAGAAATTGAAGGTTTTACCCGGCTGTGACCACTGCTTCCATTGTGAGTGTGTTGATAGATGGCTTTCCAATCACTCTAGCTGCCCTCTCTGCAGATCTTCTCTCAAGGTTCATCCTTCCTTTCCCAAGATTTTGATTCAAGAACCACCCAATCTTCCCTTTTAG 615 0.522 MMKLGTGADRDVQSRVSMQPCLGCVMFPKREWGIAAAAMTSQDSQGFTWHYTELDDRNLEIRGRTFFFVVVLFSIILILILLFLYARWIWRYRAQRPSDGPILAPPPPPPGLDPSSIKNLPMVLYHRTSASNSKLEETECCICLGTFNDGEKLKVLPGCDHCFHCECVDRWLSNHSSCPLCRSSLKVHPSFPKILIQEPPNLPF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0052 204 ProSiteProfiles Zinc finger RING-type profile. 140 182 IPR001841 -
Mibi05g0052 204 SUPERFAMILY RING/U-box 131 190 - -
Mibi05g0052 204 FunFam RING-H2 finger protein ATL66 104 187 - -
Mibi05g0052 204 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 61 186 - -
Mibi05g0052 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 188 IPR013083 -
Mibi05g0052 204 Pfam Ring finger domain 139 182 IPR001841 -
Mibi05g0052 204 SMART ring_2 140 181 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0052 Mibi-ChrMibi05 930683 932965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0052 34 190 C3H Transcription Factor Family AT3G11110 44.512 3.57e-38 127