LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi05g0045	ATGGCGGTCTCCGACGTCGGAGCTGTCCTAGAATTCCTGAGGAACAATGGCTTCACAGAGGCAGAGTCCGCCCTCAAACAGGACTTCATCGAAAAGGCTGATACAGCCTCCTTCGACTACGAGAAATTCTTCTTCCCCATGGTGCCGCCGCCTCCGCCTGTCAGACTCCGATCCTTTTCCCGATTTTCGGAGAGACAGTGTACCAGAGATTGCTCCAAATCAAGCTCTCAGTCGTCCGACGATGAGTTTGTGAGCTTGGGCTCTTCTACTTCTGGCGTTTGTTCTTCCGAATTCATCAATCCATATGGAATTCGCTCCTCATCCCAAACTCACAAAGATTCTGAATCTTCGTCAGATAGATTATCTCAGTTTGGCACAGCACGTGATTACCATGACTTTGACATGCAAAATGAACCGTATTGGTACAATGAGAGAGATGATGACGATTTCATGACCCCCAATTTTGAGGGGCCAGAGTTCTTCGGCTGTCACAGTGAGGATAAGTTTATCATGACATCAGGAATGGAAAATCAACATGAAAATCTTCTGGAAAATAATTACAAAGGTGATGTATTCCAAGTGGAGGGAAATGGTGATTGCATGGACAAGCTGTGCCTTTATAACCATTCTGATGATAAAAATGAAAGTGTGACTTGTTTGAAAGACTTTTGTCATATTGGTAAGAAAGAGCTGCTTGAAGGAGGATTAGTTGGAGAGGTTGAGAATCCTACTTTTGTCTATACTTGTGAAATTCCTTTTAGCAAACGCTCAGCAGGTTCAGGAGAGTCTTGTAGTGGAGATCCTAGTAATGATCGTTGCCCAAGTTTAAAGGAAATTCATCTGAATGATTTGCATTTGAAGGTTGTTGGGGATATTTCCTCTATTGATTCTGATCCAGAGCATTCTATGAACCAAACTTTTGACCTCTATCCTAACAGTAACAGCAACAAGGGGCTCAAAGCTCCCTATGACTTAACTATTGAAGTTGCTGAAACAGACCTGCCAAGTGGACTCGCCAACTACAAAGCTCAAGATTGTGAAGAATTCACTGAAGAATGCGAAGATCCTGAAAATGCAGCAGATGGAGAAGATGCTACCGATGATGAACTTTTAAAGTACATTCACGAGGATGAATATGAAGTATTTGATCTGAGAATTATACATAGAAAAAACAGGACTGGATTTGAAGAAAGCAAAGATCTGCCCATTGTGCTGAATAAAGTCATAGGTGGCAGATACTATGTGACCGAATATCTTGGTTCGGCTGCCTTCAGTAAGGTTGTACAGGCACATGATCTTCAGACAGGAATAGATGTCTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGACCAAAGCTTAGATGAAATTAAACTTCTAAAGCTTGTCAATAGGAATGACCCAGCTGATGAACACCACATATTGCGACTTTATGATTACTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACCTATATGAATTTCAGAAATACAACCAAGAATCTGGTGGTGAGGCATATTTTACAATGAACAGATTGCAGCTCATTACTCGTCAGTGTTTGGAGTCCTTGCAATACTTGCATAGCTTGGGAATAATTCATTGTGACCTGAAGCCAGAAAATATTCTTATTAAAAGTTATAAAAGATGCGAGATTAAAGTTATTGATCTAGGGAGCAGTTGCTTTCAATCAGACAGTTTATGCCTATATGTACAGTCACGATCCTATAGAGCCCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGACCTATGGTCTCTAGGCTGTATTTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTTGCAATTATTCTTGCGCGCATGATTGGAATGCTTGGCCCTATTGATCTGGAGATGTTAGTCAGGGGGCAGGAAACACACAAATATTTCACAAAAGAATATGATATTTACCATGTAAACGAGGAGACAAACCAGTTGGAGTGCATAATTCCAGAGGAGTGGTCGTTGGAGCAGCACCTTCAGGTTTCTGATACGTTGTTTATTGACTTCGTCAGGTTATTGCTGAACACCAACCCCAGAAGCCGACCAACCGCAAGACAGGCACTAAAGCATCCATGGCTTTCCCATGTCTATGACTCCCAGTAG	2169	0.4172	MAVSDVGAVLEFLRNNGFTEAESALKQDFIEKADTASFDYEKFFFPMVPPPPPVRLRSFSRFSERQCTRDCSKSSSQSSDDEFVSLGSSTSGVCSSEFINPYGIRSSSQTHKDSESSSDRLSQFGTARDYHDFDMQNEPYWYNERDDDDFMTPNFEGPEFFGCHSEDKFIMTSGMENQHENLLENNYKGDVFQVEGNGDCMDKLCLYNHSDDKNESVTCLKDFCHIGKKELLEGGLVGEVENPTFVYTCEIPFSKRSAGSGESCSGDPSNDRCPSLKEIHLNDLHLKVVGDISSIDSDPEHSMNQTFDLYPNSNSNKGLKAPYDLTIEVAETDLPSGLANYKAQDCEEFTEECEDPENAADGEDATDDELLKYIHEDEYEVFDLRIIHRKNRTGFEESKDLPIVLNKVIGGRYYVTEYLGSAAFSKVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNRNDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGGEAYFTMNRLQLITRQCLESLQYLHSLGIIHCDLKPENILIKSYKRCEIKVIDLGSSCFQSDSLCLYVQSRSYRAPEVMLGLQYDEKIDLWSLGCILAELCSGEVLFPNEAVAIILARMIGMLGPIDLEMLVRGQETHKYFTKEYDIYHVNEETNQLECIIPEEWSLEQHLQVSDTLFIDFVRLLLNTNPRSRPTARQALKHPWLSHVYDSQ	722

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi05g0045	722	MobiDBLite	consensus disorder prediction	70	90	-	-
	Mibi05g0045	722	Gene3D	Phosphorylase Kinase; domain 1	407	494	-	-
	Mibi05g0045	722	Gene3D	Transferase(Phosphotransferase) domain 1	467	715	-	-
	Mibi05g0045	722	SUPERFAMILY	Protein kinase-like (PK-like)	402	719	IPR011009	-
	Mibi05g0045	722	FunFam	Serine/threonine-protein kinase ppk15	492	716	-	-
	Mibi05g0045	722	FunFam	Putative serine/threonine-protein kinase dyrk2	407	494	-	-
	Mibi05g0045	722	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	539	551	IPR008271	GO:0004672\|GO:0006468
	Mibi05g0045	722	ProSiteProfiles	Protein kinase domain profile.	413	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi05g0045	722	CDD	PKc_DYRK_like	413	715	-	-
	Mibi05g0045	722	SMART	serkin_6	413	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi05g0045	722	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	108	716	-	-
	Mibi05g0045	722	Pfam	Protein kinase domain	415	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi05g0045	Mibi-ChrMibi05	780647	784803	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi05g0045	410	710	MAP Kinase Gene Family	AT5G19010	31.153	3.38e-33	133

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Mibi05g0045		Pkinase	1.5e-51	CL0016