Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0043 ATGAATGACCCCCGGGTTCTCTCCGAGTCGTCCGACACAGACTCCGACCACGGCCCGTCTGGGTCGGCGATCCTTCGCCACACGGACCTCTCAGGCTCCATTTTCAAATCCTATTTGGACTTCATCGGCCACTCATCGGCAACCTCTGCCGACCTCTCAAAGATCCAGTCTTTTCTCACATCCTCCTCCTCCGGCGCCCTCTCATGCTTGATATGCCTCGAACGCATCACACCCTCCGACCCCACCTGGTCCTGCACCTCCCTCTGCTACGCCCTCTTCCATCTCTTCTGCATTCAGAGCTGGGCCCGCCAGGCGTCCGACCTCGCTGCCTCACGCGCCGCCACGCGCCTCCCTCTCTCACCTGACAGGGCTGCCGAGTGTGCCACCTGGAACTGCCCTAAATGCAGGGCCCAATACTCCAAAACCCAGATCCCTAAAGCATACGTGTGCTTCTGTGGGAAATTGGAGAATCCTCCCAGTGATGATCCCTGGGTGTTGCCTCATTCATGCGGTGATGTTTGTAATAGGCCGTTGAAGAACAAGTGCGGGCATTATTGCTTGTTGCTGTGCCATCCAGGGCCATGCCCATCCTGCCCAAAGCTCGTCAAGTCTCGCTGCTTTTGCGGGTCTCTTCAAGATGTTCGCAGATGCGGGTACAAGGAGTTTTCATGTCACAATCATTGTTCCAAGCTCTTGGACTGTGGGGTTCACAGGTGTTCTGAGATCTGTCATGTTGGCCCCTGCCCACCTTGCCGAGCCCGTGGAGTTTTCATGTGCCAATGCGGGCGGCAAAAGGAGGAGAGGGAGTGTTGTGATCGCGTTTTTCAATGCGATACTCCATGCGAGAAGCTTCTCACCTGCGGGAAGCACGTTTGTCTGAAAGGATGTCATTCGGGTGGGTGCGGCGAGTGCCCTTTCCAGGGTAAGACAACTTGCCCCTGCGGGAACAGGATTTACAAAGACATTCCTTGTGATGCTGTGGTACAATTGTGTGGAGCCACTTGCGATAAATTGCTCAGTTGTGGATATCACAAGTGCCCCGAGAGATGCCACCGTGGGCCCTGCATTGAGACCTGTAGAACTGTTGTAAGGAAATCCTGCCGTTGTGGGAGCCTCAAGAAAGAGGTCCCTTGTTATCAAGAGTTGTCATGTGAAAGGAAGTGTCAGAGGATACGTGACTGTGGGAGGCATCCATGTAAACGTCGCTGTTGTGACCGTGACTGCCCTCCATGTTCAGAGATATGTAGCAAGAGGCTTCGATGTAAAAATCATAAATGTCCTTCTCCATGCCACAGGGGCCCCTGTGCTCCATGTCCAATAATGGTGACAATCTCATGTGCATGTGGTGAGACACATTTTGAGGTTCCTTGTGGCACTGAAATGGATCAAAAGCCACCTAAATGCCGAAAACGTTGTCCTATTACTTCTTTATGCAGGCATGCACCAATTTCCAAGCCTCACAAATGTCATTATGGAGCCTGTCCTCCTTGCCGGCTTCCTTGTGAAGAAGAGTACCCTTGTGGCCACAAGTGCAAATTAAGGTGTCATGGTCCAAAACCTCCTCCTAATCCGGAGTTTACGCTGAAGCCAAAGAAAAAGAAGATAATAAAGCAGAGTGAAGGTGTTTCTGGCACACCCTGCCCTCCTTGTCCTGAACTTGTATGGAGATCATGTGTTGGGCAACACATTGGAGCAGAGAGAATGATGGTCTGCTCTGATAAATCGCAATTTCGCTGTGAAAATTTGTGCGGAAATCCTCTGCCATGCGGTAATCATTTTTGTACTAAAATCTGTCATGCCTTAGAGACACAGTCTTCCTTGAACCAGCTACAGAGAAGTGAGCCTTGTGAAGATTGTTGTCTTCCATGCCAAAAGATTAGAGAGCCCAAGTGTCCACATCACTGCCCTCAGCCTTGCCATCCTGGAGAATGCCCTCCCTGCAAAGTGCTCATTAAACGGTCTTGCCATTGTGGCTCAATGGTCCATGTTTTTGAGTGCATCTACTACAACAGCTTGTCTGCCAGAGGTCAAGAAACTGTTCGATCATGCCGTGGGCCTTGTCACAGAAAGTTGCCATATTGCACACATCTGTGCCCGGAGACATGTCATCCTGGTCAATGTCCATATCCTGATAAATGTTCTAAAAAGGTCACTGTTCGTTGCAAATGTCAAACTCTGAAGAAAGAGTGGCTATGTCAAGATGTTCAAGCAGCCTATCATCGTGACGGTTGCCATCCTAGAGATATACCAAAAAATCACTTTGGGATTGGACTTATTCCTTGCAATTCTGATTGTAAGAGTAAAGTGCAAGTTGTTGAGTCAGAACTGCAATTACGTAGACCCCAAGTTATGGAGGAAAAAGCGCCTGAGACTGGAAAGCCAGTACCAAAACGACGGAGAAGGCGGGAACGCATACAGGAGTCCGGCCAATCAACAAAACTGCAGAAAATTGCATCTGCTGCGAAGCGGCTTCTTCTATTTGTTGTCCTTTTTGTGGCCCTTCTTGCTGCTATATATTATGGTTACGAGGGTCTTCTATGGCTCAATGATTGGATGAACGAAGTTGATGAACGAAGACAGAAAAGATATCTTCGAATCTCATAA 2604 0.4965 MNDPRVLSESSDTDSDHGPSGSAILRHTDLSGSIFKSYLDFIGHSSATSADLSKIQSFLTSSSSGALSCLICLERITPSDPTWSCTSLCYALFHLFCIQSWARQASDLAASRAATRLPLSPDRAAECATWNCPKCRAQYSKTQIPKAYVCFCGKLENPPSDDPWVLPHSCGDVCNRPLKNKCGHYCLLLCHPGPCPSCPKLVKSRCFCGSLQDVRRCGYKEFSCHNHCSKLLDCGVHRCSEICHVGPCPPCRARGVFMCQCGRQKEERECCDRVFQCDTPCEKLLTCGKHVCLKGCHSGGCGECPFQGKTTCPCGNRIYKDIPCDAVVQLCGATCDKLLSCGYHKCPERCHRGPCIETCRTVVRKSCRCGSLKKEVPCYQELSCERKCQRIRDCGRHPCKRRCCDRDCPPCSEICSKRLRCKNHKCPSPCHRGPCAPCPIMVTISCACGETHFEVPCGTEMDQKPPKCRKRCPITSLCRHAPISKPHKCHYGACPPCRLPCEEEYPCGHKCKLRCHGPKPPPNPEFTLKPKKKKIIKQSEGVSGTPCPPCPELVWRSCVGQHIGAERMMVCSDKSQFRCENLCGNPLPCGNHFCTKICHALETQSSLNQLQRSEPCEDCCLPCQKIREPKCPHHCPQPCHPGECPPCKVLIKRSCHCGSMVHVFECIYYNSLSARGQETVRSCRGPCHRKLPYCTHLCPETCHPGQCPYPDKCSKKVTVRCKCQTLKKEWLCQDVQAAYHRDGCHPRDIPKNHFGIGLIPCNSDCKSKVQVVESELQLRRPQVMEEKAPETGKPVPKRRRRRERIQESGQSTKLQKIASAAKRLLLFVVLFVALLAAIYYGYEGLLWLNDWMNEVDERRQKRYLRIS 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0043 867 MobiDBLite consensus disorder prediction 782 808 - -
Mibi05g0043 867 CDD NF-X1-zinc-finger 170 218 - -
Mibi05g0043 867 CDD NF-X1-zinc-finger 277 324 - -
Mibi05g0043 867 CDD NF-X1-zinc-finger 411 459 - -
Mibi05g0043 867 CDD NF-X1-zinc-finger 224 272 - -
Mibi05g0043 867 CDD NF-X1-zinc-finger 331 380 - -
Mibi05g0043 867 SUPERFAMILY RING/U-box 66 146 - -
Mibi05g0043 867 MobiDBLite consensus disorder prediction 1 18 - -
Mibi05g0043 867 Pfam NF-X1 type zinc finger 695 713 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 421 439 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 488 498 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 182 199 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 507 516 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 589 599 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 287 305 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 394 412 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 633 648 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 234 252 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 Pfam NF-X1 type zinc finger 341 359 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 MobiDBLite consensus disorder prediction 1 22 - -
Mibi05g0043 867 SMART znfxneu3 287 306 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 234 253 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 589 625 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 421 440 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 507 552 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 478 499 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 394 413 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 631 649 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 694 715 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 182 200 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 SMART znfxneu3 341 361 IPR000967 GO:0005634|GO:0008270
Mibi05g0043 867 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 47 503 IPR034078 GO:0003700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Mibi05g0043 zf-NF-X1 1.7 No_clan