Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0035 ATGGCCTTTGGCTGCCGAGATCGTACGTCGGAGTTCCGATCTCTCTCTCAGACTCTGAAGAAGATTGAGGGACTCTCATTGCCCAATCAAGCTGAAGATGATCCTTCCACATCCAAACAATATCCTCCCCTCTCCTATTCTGGATCTGAATTCAACAGAAAGGCCTCTCGAATCGGCTTGGGTATCCATGAAACCTCCCACAAGATTTCGAGGCTTGCTCAATTGGCGAAGAAGTCTTCGATGTTTAATGATCCCACTGTGGAGATACAAGAATTGACGGCTTTGATTAAGAATGACATCACGGCATTGAATTCAGCTCTTTCAGATTTACAAACTATTCAGAACATGGAAATAGCTGATGGAAATTATTCGGACGATAGAATTGTTCATTCAACAGCTGTTTGTGATGACTTAAAAGGCAAACTTATGGGGGCAACCAAGCAGCTTCAAGATGTGTTAACTACTAGGACAGAGAACATCAAGGCTCATGAGAATAGGAAGCAGATATTTTCCAAGAAAGTATCTAGGGACAATCCTTTCCAGCATCGACCAAAGCCAATCACTGAGCCACCCCCTTGGTCAAATTCGTTAAATGCATCTGATAGTTCAGACCGGACATCAGCATCCCTATCAAATGAAGTTGCACCGAGCAATCAATTAAGACGGCGGCTAGCCACTGACAACACTCCATCCCAGCAAATGGAAATGTCTATGATGCAGCAAGTCGTCCCAAGACAAGAAAGCTATAGTCAGAGTCGTGCTACTGCTCTGCACAGTGTGGAATCTACTATCACAGAACTTAGTGGGATCTTCACTCATTTGGCCACAATGGTTGCTCATCAAGGGGAATTAGCTATCAGGATTGATGACAATATGGATGAGTCATTGGCGAATGTTGAAGGAGCTCGCAGTTCTTTATTGAAGTATCTCAGCCGAATATCATCAAATAGGTGGCTTCTAATCAAGATATTTGCCATTCTGATACTTTTTCTACTCATCTTCATATTTTTCGTGGCCTAA 1020 0.4314 MAFGCRDRTSEFRSLSQTLKKIEGLSLPNQAEDDPSTSKQYPPLSYSGSEFNRKASRIGLGIHETSHKISRLAQLAKKSSMFNDPTVEIQELTALIKNDITALNSALSDLQTIQNMEIADGNYSDDRIVHSTAVCDDLKGKLMGATKQLQDVLTTRTENIKAHENRKQIFSKKVSRDNPFQHRPKPITEPPPWSNSLNASDSSDRTSASLSNEVAPSNQLRRRLATDNTPSQQMEMSMMQQVVPRQESYSQSRATALHSVESTITELSGIFTHLATMVAHQGELAIRIDDNMDESLANVEGARSSLLKYLSRISSNRWLLIKIFAILILFLLIFIFFVA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0035 339 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 5 21 IPR021538 -
Mibi05g0035 339 ProSitePatterns Syntaxin / epimorphin family signature. 253 292 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mibi05g0035 339 MobiDBLite consensus disorder prediction 163 183 - -
Mibi05g0035 339 MobiDBLite consensus disorder prediction 192 223 - -
Mibi05g0035 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Mibi05g0035 339 PANTHER SYNTAXIN 49 334 IPR045242 -
Mibi05g0035 339 CDD SNARE_syntaxin5 250 322 - -
Mibi05g0035 339 SMART tSNARE_6 242 309 IPR000727 -
Mibi05g0035 339 Pfam SNARE domain 284 335 IPR000727 -
Mibi05g0035 339 MobiDBLite consensus disorder prediction 26 48 - -
Mibi05g0035 339 MobiDBLite consensus disorder prediction 163 223 - -
Mibi05g0035 339 Gene3D - 47 302 - -
Mibi05g0035 339 SUPERFAMILY t-snare proteins 49 302 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0035 Mibi-ChrMibi05 701029 703555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0035 1 339 SNARE and Associated Proteins AT5G05760 67.941 4.48e-156 439