Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0025 ATGGCGCCCCTCGATTCTCCCAACTTCTCTGGGCTTGCAGACTCTAACGTTGCCGGTAGAGTGAAGGGACCGTGGTCCCCTGAGGAGGATGCCGTTCTCTCTCGATTGGTCGCCAAGTTTGGTGCCAGAAATTGGAGCATGATCGCCCGTGGCATTCCCGGTCGCTCCGGCAAGTCCTGCCGTCTCCGTTGGTGTAATCAACTTGACCCCGCTGTTAAACGCAAGCCCTTTACTGAAGAAGAAGACCGTACTATAGTTGCAGCTCATGCAATGCATGGAAACAAATGGGCAGTAATAGCTAGGCTTCTTCCGGGAAGAACAGATAATGCTATAAAAAATCACTGGAATTCTACACTTAAGTGCAGGTGCTTGGATCTTGGAAGATACATATCAGTGGGTGCTGGCATGGTGGAAGAGGGTAGCCTCGAGGCCCCCGACAAAATGAAGGCATCTTCCGAAGAAACCATGTCAGCAGGGGATATCAATTCATTGAATTTGACAAAAATTAAAAATGTGGGGACGGATATTAATCAGCATGAAGATAATCCTCCAAGAACCAATGGTGCTGAAGTGGAGGAACACTCTACCCTATGTCAACCAGTAGCACGTGTTAGTGCATTTAGCGTCTATAATCCTCCAAGCAGGCCAACAACTGGACCGGCATATTCAAGGATGCTCCCAATGCAAGGCCCTTTGATCCCATCGTCCAGAGTTGAAGCAGGAGACTGCAAGCTACTTGAAGATGTTAGCAGTGAGCCCATGGTTCCGGTGCAATGTGGTCATGGCTGCTGTTCTGCAAGTTATCGGGAAAACCATTCTCATGGTTCGCTACTTGGGCCTGAGTTCATTGACTATTTGGAAACTTCCTCCTTTTCAAGTCATGAATTGATCTCTATAGCTACAGATTTGAACAATATTGCTTGGATTAAGAGTGGCCTAGATGCCAGAGTAACGGAGAATGAAGCAAACTTAATGGCATCTCAAGGTGGTGCTACTGCATTTCAAAATAGATTCTTTGAGGAGGGAGCGAGCAAGTGTGTGGGTGTGAATCAAGATATGCTAACAACGCAGATGTCTAGTCATCCACTTGCAATGCCTGCAGAAGTTTGTCTTCGTGGCTTATTGTGCTGGCTGGAAGTTTGTCTCAACTCAAATGTGATCTCAGGGACTCCTAAAATGTTTCTACCGAGTTGTCCTTCCTCGTTGACGCGAGGTCATATGATGGTTTCCTTGAAATACCCGCTCCAAGGCCCTCTCCCTAAGAACCTTCCCCTTATCATCCACCTAACGGCCCTCTCCAATGCGCCGATGGGGTATATGGATAGGTCATGTTCCTGCCTCAGCTTTTCCAATGCGATTGATTCCAACTCTTCAAATGTGTTCCACTTCCAGATCACTCCTGACAAGGAGAGGGAGACGGAGAGAATGAGAGACAGAGCGAGTGAACTTTCGGACATGAGGAAGGGTTGGGGGAGTTGA 1479 0.4787 MAPLDSPNFSGLADSNVAGRVKGPWSPEEDAVLSRLVAKFGARNWSMIARGIPGRSGKSCRLRWCNQLDPAVKRKPFTEEEDRTIVAAHAMHGNKWAVIARLLPGRTDNAIKNHWNSTLKCRCLDLGRYISVGAGMVEEGSLEAPDKMKASSEETMSAGDINSLNLTKIKNVGTDINQHEDNPPRTNGAEVEEHSTLCQPVARVSAFSVYNPPSRPTTGPAYSRMLPMQGPLIPSSRVEAGDCKLLEDVSSEPMVPVQCGHGCCSASYRENHSHGSLLGPEFIDYLETSSFSSHELISIATDLNNIAWIKSGLDARVTENEANLMASQGGATAFQNRFFEEGASKCVGVNQDMLTTQMSSHPLAMPAEVCLRGLLCWLEVCLNSNVISGTPKMFLPSCPSSLTRGHMMVSLKYPLQGPLPKNLPLIIHLTALSNAPMGYMDRSCSCLSFSNAIDSNSSNVFHFQITPDKERETERMRDRASELSDMRKGWGS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0025 492 CDD SANT 76 119 IPR001005 -
Mibi05g0025 492 SMART sant 73 121 IPR001005 -
Mibi05g0025 492 SMART sant 21 70 IPR001005 -
Mibi05g0025 492 MobiDBLite consensus disorder prediction 469 485 - -
Mibi05g0025 492 ProSiteProfiles Myb-like domain profile. 22 68 IPR001005 -
Mibi05g0025 492 Pfam Myb-like DNA-binding domain 74 118 IPR001005 -
Mibi05g0025 492 Pfam Myb-like DNA-binding domain 22 68 IPR001005 -
Mibi05g0025 492 MobiDBLite consensus disorder prediction 469 492 - -
Mibi05g0025 492 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Mibi05g0025 492 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Mibi05g0025 492 PANTHER MYB PROTEIN-RELATED 22 176 - -
Mibi05g0025 492 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Mibi05g0025 492 CDD SANT 24 66 IPR001005 -
Mibi05g0025 492 Gene3D - 21 73 - -
Mibi05g0025 492 Gene3D - 76 122 - -
Mibi05g0025 492 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 68 IPR017930 -
Mibi05g0025 492 FunFam MYB transcription factor 22 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0025 Mibi-ChrMibi05 556660 562615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0025 17 324 MYB Transcription Factor Family AT3G55730 50.617 9.26e-98 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi05g0025 Myb_DNA-binding 4.4e-14 CL0123