Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2124 ATGAGTTACAGCGACAGGAACAGGGGAGCAAAAGAGAGGGAATGTGAAGATTCGGTCTTGCAGAATTCTGGGGAATCAGAGTCCAAATCGGTTGGACAGAATGGATCGATAACAACTCCACAGCTTACAATCGATGAGAATCTTCTGGTTGACCCTAAACAACTCTTCATTGGGGCAAAAATTGGAGAAGGGGCTCATGGGAAAGTTTATGAAGGAAGGTATGGAGATCAAATTGTTGCAATTAAGGTTCTGCATCGTGGGAGCACTTCAGAAGAAAGATCCGCCCTTGAAAATCGTTTTGCTAGGGAGGTTAATATGATGTCCCGTGTCCATCATGAGAACCTGGTTAAGTTTATTGGAGCTTGCAAGGATCCTCTGATGGTTATTGTCACAGAGCTGTTGCCAGGGATGTCGCTGAGGAAGTATTTGACTAGTATACGCCCTGGACTATTAGACTGTCAGGTGGCTATAAACTTTGCCCTTGATGTTGCACGGGCCATGGATTGCCTACACGCTAATGGGATCATACATAGAGATTTGAAACCTGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTCACTGAAATGATGACCGCAGAAACTGGGACTTATCGATGGATGGCACCAGAGTTGTACAGTACTGTGACACTACGTCAAGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTGTACAGCTTTGGAATTGTTTTGTGGGAACTTCTAACGAATCGCATGCCTTTTGAAGGGATGTCAAATTTACAAGCTGCTTACGCTGCTGCTTTTAAGCATGAGAGGCCCAGCCTTCCAGAAGATATACCTCCTGATCTTGCCTTTATCATACAATCATGCTGGGTTGAGGATCCAAACTTAAGACCGAGCTTTAGTCAGATCATCCGTATGCTTAACGCCTTTCTCTTCACTTTGTCACCTGCGCCGCCCTCCCCTAGTTCGCAGGAACCTGAAAATGTTGAACCTGTGGCCACAGCAACTACGAGTAATGGTACCATCACTGAGTATTCTGCCCGAAACAGAGGGAAGTTTGGATTTCTTCGCCAATTGTTCACTTCCAAAAGGACAAGAAACTAA 1131 0.4465 MSYSDRNRGAKERECEDSVLQNSGESESKSVGQNGSITTPQLTIDENLLVDPKQLFIGAKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERSALENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPGLLDCQVAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKHERPSLPEDIPPDLAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPAPPSPSSQEPENVEPVATATTSNGTITEYSARNRGKFGFLRQLFTSKRTRN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2124 376 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Mibi04g2124 376 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Mibi04g2124 376 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2124 376 MobiDBLite consensus disorder prediction 1 20 - -
Mibi04g2124 376 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Mibi04g2124 376 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Mibi04g2124 376 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Mibi04g2124 376 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Mibi04g2124 376 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2124 376 MobiDBLite consensus disorder prediction 1 38 - -
Mibi04g2124 376 SUPERFAMILY Protein kinase-like (PK-like) 47 342 IPR011009 -
Mibi04g2124 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Mibi04g2124 376 Gene3D Transferase(Phosphotransferase) domain 1 138 348 - -
Mibi04g2124 376 MobiDBLite consensus disorder prediction 21 38 - -
Mibi04g2124 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 318 - -
Mibi04g2124 376 PIRSF ILK 10 325 - -
Mibi04g2124 376 FunFam Kinase suppressor of Ras 1 44 134 - -
Mibi04g2124 376 MobiDBLite consensus disorder prediction 327 346 - -
Mibi04g2124 376 CDD STKc_MAP3K-like 61 316 - -
Mibi04g2124 376 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2124 Mibi-ChrMibi04 52940064 52943379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2124 43 376 MAP Kinase Kinase Kinase AT5G01850 73.464 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mibi04g2124 PK_Tyr_Ser-Thr 9.6e-60 CL0016