Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2120 ATGCTGGACACATACGACGCCGCCGTCGACGAAGGCACGCCGTCGGCGGCGGTGTTGCTGGGAAAGTACGAGTTGAAGAAGCTGTTAGGCGTGGGAGCCTCGGCCAAGGTGTACCACGCCACAAATGTGAGTACAGGAGAGAGCGTGGCCATTAAAGCAGTGAGCAAGGGACAAGTTTTCAGGGGAGGCCTGATGGCGCACGTGGAGAGGGAAATCGCTATCATGCGCCGCCTCCACCATCCCCACACACTCAAGCTCTTAGAAGTGCTCGCCTCCAAGTCCAAAATCTACTTCGTCCTCGAATTCGCCCACGGCGGAGAGCTCTTCCACAAGGTCTCTCAGGGTCGTCTCTCGGAAGATCTCAGCCGTCGATACTTCCACCAGTTGATCTCCGCCGTCCGTTACTGCCACTCCGCAGGCGTCTTCCACCGCGACCTGAAGCTGGACAACCTATTAATGGACGAGCACATGAACCTTAAGGTGTCCGACTTCGGATTGGGCGCCCTCAAGGACCACGTCAGCACCAAGGATGGGTTGCTCCACACCGTGTGCGGCACTCCAGCCTACGTGGCTCCCGAGATTCTCGCCAGGAAAGGCTACGACGGCGCCAAGGTCGACGTCTGGTCCTGCGGTGTCATCCTCTTCGTCCTCACCGCCGGCTACTTGCCTTTCAACGACCACAGCCTTCCCACCATGTATAGGAAGATCTACAGAGGGCAGTTTCGGTTCCCGAGATGGACGTCACCGGAGCTGCGGCGATTCCTGTGCCGGTTGCTGGATAAGAATCCGGAGACGAGAATGACGGTGGATGAGATGATGGCAGACCCGTGGTTCAGCAAAGGGTACAGGGAGGTGCGGGTCCCGCACAAGGACTCCGAATTCGGGTCGGGTCGACCCGTGGGACTCAACGCCTTCGACTTGATATCCTTTTCGTCCGGCTTCGATATGTCGGGCTTGTTCACTGAGTCAGGAGTCTGGGAGTGTGTGGAACGCATCGTTTCGGGGGAGAAGCCGGCGAAGATAATGGAGAAGGTGGAGGTAGTGGCGAGGGAAGAGGGGGTGATGGTGAGGAAGGAGGGGAATGAGGAAAGGGTGAGGTTGGAGGGGCAAAATGGTAATTTGGTCATTCTGGTCAGCATTTACAGGCTGACGGAGAAGCTGGTGGTGGTGGAGGCCAAAACAAAGGAGAGGGGTGTGAGAGAAGGAGAAGAGAGAGGGGCTGCATTCTGGGAGCATAAATTGAAGCCTGAGCTTCATCGGTTGGTGTATAGAACTTGA 1278 0.5712 MLDTYDAAVDEGTPSAAVLLGKYELKKLLGVGASAKVYHATNVSTGESVAIKAVSKGQVFRGGLMAHVEREIAIMRRLHHPHTLKLLEVLASKSKIYFVLEFAHGGELFHKVSQGRLSEDLSRRYFHQLISAVRYCHSAGVFHRDLKLDNLLMDEHMNLKVSDFGLGALKDHVSTKDGLLHTVCGTPAYVAPEILARKGYDGAKVDVWSCGVILFVLTAGYLPFNDHSLPTMYRKIYRGQFRFPRWTSPELRRFLCRLLDKNPETRMTVDEMMADPWFSKGYREVRVPHKDSEFGSGRPVGLNAFDLISFSSGFDMSGLFTESGVWECVERIVSGEKPAKIMEKVEVVAREEGVMVRKEGNEERVRLEGQNGNLVILVSIYRLTEKLVVVEAKTKERGVREGEERGAAFWEHKLKPELHRLVYRT 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2120 425 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Mibi04g2120 425 ProSiteProfiles Protein kinase domain profile. 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2120 425 Gene3D Transferase(Phosphotransferase) domain 1 15 297 - -
Mibi04g2120 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Mibi04g2120 425 Pfam NAF domain 301 358 IPR004041 GO:0007165
Mibi04g2120 425 CDD CIPK_C 303 418 - -
Mibi04g2120 425 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Mibi04g2120 425 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 18 395 - -
Mibi04g2120 425 FunFam Aurora kinase A 16 106 - -
Mibi04g2120 425 FunFam Maternal embryonic leucine zipper kinase 15 294 - -
Mibi04g2120 425 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2120 425 SUPERFAMILY Protein kinase-like (PK-like) 19 289 IPR011009 -
Mibi04g2120 425 Gene3D Kinase associated domain 1, KA1 300 424 - -
Mibi04g2120 425 SMART serkin_6 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2120 Mibi-ChrMibi04 52874940 52876441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2120 18 425 CBL-interacting serine-threonine protein kinases AT2G30360 54.762 2.40e-153 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi04g2120 Pkinase 2.7e-66 CL0016