Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi04g2116 | ATGGCGAAGAACACGTTGAGGGAGATCACCACAAGGGAGATCACAGTGGCGACCACAAGCTCGACCACCATGGCGGAGAACACAAGGAGGGCCTTCTATGTCAAGGTAATTCCTCGTGCTCTTTTCTGGATGCTTGTTAGATTTGGATTTTACATTATGAAGGCAGATCGTGGAAGATCATCGTTTGTTTTAGATTTTGTAGATCTGAGGATTCTGAATTTGGTCCCTAATTTTAAGAAGGCGGTGAATAGATTGAACAAACTAGAGGTTAGAAGAGAGAGGATAAGGCTTCTGGCTATGAAGGTGAGAATTCTCGGCCGGTTAGTTCCTAGTTGCCAAAAGGCGTCATTTCTAAGCCTTCTGGAAGAAACTAGTGATTACATTTTGGCCTTGGAAATGCAAGTATGA | 408 | 0.4363 | MAKNTLREITTREITVATTSSTTMAENTRRAFYVKVIPRALFWMLVRFGFYIMKADRGRSSFVLDFVDLRILNLVPNFKKAVNRLNKLEVRRERIRLLAMKVRILGRLVPSCQKASFLSLLEETSDYILALEMQV | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi04g2116 | 135 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 84 | 135 | IPR036638 | GO:0046983 | |
| Mibi04g2116 | 135 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 84 | 135 | IPR044660 | GO:0006355 | |
| Mibi04g2116 | 135 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 82 | 131 | IPR011598 | GO:0046983 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi04g2116 | Mibi-ChrMibi04 | 52825657 | 52826064 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi04g2116 | 94 | 135 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G09250 | 61.364 | 1.24e-10 | 55.1 |