Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2100 ATGCATAGCAAAGGGGAGGTGAAAGAAGGCGATAGGAGAAAAGCATGTGAAGTTGACTTTGATTCTTCAATGCCGCATATACGTGAGATAGTTCCTAGGAAAGAGGTTGATGGCATTGTTGATTTCGAAATTGAGAAGCAGAATTCCAATGGCAGTTGCTCTCTTTTTCCGTTACTATCTTCCCCAACCCCTTCTCTCTTTCTGTTCCAGCTTTTCCTCCATTTCCTCATTGGTTCCTGCTACATACTTTTTGAGTTCCCACTTCCATCCCCTTTGGGTACCCTTGGTTTTGGAATCACCATCTTTGATATGGGAGGTTGTTGCAGTATTGAGATTTCTTGTGGAGGCAAGGTGTTTAGGAACATTGATGATGATGGAGAATATGGTCACCCAGAACGCCAAGATCATATTGCTTATGAACATTCCGGGGCTCGAATCAGATTAAGAGGTTCCTCCAGGTTTACATCAATGTATTGCCAACAAGGAAGTAAAGGGATCAACCAAGATGCATTAACAGTTTGGGAGGGCTTTTCTGGAGACAAAGACATGATCTTCTGTGGTGTGTTTGATGGTCATGGTCCTCTTGGACACAGGGTTTCACAATACATACGCGACCATCTTCCCGCAAAAATCTCTAAATCAATCAAAGTGTCTCAAAAGAAGAGGGCCAGCAAACTGTGGGATCCTTATCCTCGGGATATAAGCAGCCATGTTAATCTATCTGGGAGAAATGGCCAAAACATGTCCCTTGCTTCATGGGAGCGGAACCTTGTCAAATCTTTCAACGAGATGGATGAAGATGTTGCTCGAGACATTAACACTGACGGCTTTTCCAGCGGTGCCACTGCTGTAACTGTAATTCAAAAGGGTGACCAATTGATAATTGCAAATTTGGGAGACTCTCGCGCAATTCTTTGCACAAGAGGAGATAACGACGAGCTTAATCCTATTCAACTCACCGTGGACTTAAAACCTGATATTCCAAGCGAAGCCATGAGAATCCATAAATGTGAAGGCAGAGTTTTCGCTGCAGCAGAAGAATCACATGTATACAGAATATATATGCCTGATGAGGACTGTCCTGGACTTGCTATGTCAAGAGCCTTTGGAGATTTCTGCCTAAAAGATTATGGCCTCATCTCAGTTCCTGACGTCTTCTATAGAAAAATTACTAAGCAGGATGAATTTGTAGTGTTGGCAACAGATGGGATTTGGGATGTGCTATCAAACGCCGAAGTGATAAGCATAGTTGCTTCAGCACCAAGGAGGTCCATGGCAGCAAAGATGTTAGTAAGACATGCTGTTTCTGTATGGAGATACAAGTACCCTAATTCCAAGATCGATGATTGTGCAGTGATATGCTTGTTCCTGCATGAACCACCTTCTTTACCAGATTCGCCACATGCTGGGAGCAACGTGAATAAAAGGAAGCAGCTCAGTCCCCATGGCTCTGCACCCTCTAGACATGAAGGCACTGAAAGTTTGGTAGAAGATGGAAAGAGTTCTATAATAACATTAGGGCAAGAATTGGATGGTCGTTCAAGATTGTCCAGAGCCAACTCAGTATCCAATTCAAAATATCCAAGACTCTCTAGGGTTGTGAGTAGAAGATCTTCTCAGTGCATTGATGGGGTTGAAGTTTATTAG 1647 0.4323 MHSKGEVKEGDRRKACEVDFDSSMPHIREIVPRKEVDGIVDFEIEKQNSNGSCSLFPLLSSPTPSLFLFQLFLHFLIGSCYILFEFPLPSPLGTLGFGITIFDMGGCCSIEISCGGKVFRNIDDDGEYGHPERQDHIAYEHSGARIRLRGSSRFTSMYCQQGSKGINQDALTVWEGFSGDKDMIFCGVFDGHGPLGHRVSQYIRDHLPAKISKSIKVSQKKRASKLWDPYPRDISSHVNLSGRNGQNMSLASWERNLVKSFNEMDEDVARDINTDGFSSGATAVTVIQKGDQLIIANLGDSRAILCTRGDNDELNPIQLTVDLKPDIPSEAMRIHKCEGRVFAAAEESHVYRIYMPDEDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKITKQDEFVVLATDGIWDVLSNAEVISIVASAPRRSMAAKMLVRHAVSVWRYKYPNSKIDDCAVICLFLHEPPSLPDSPHAGSNVNKRKQLSPHGSAPSRHEGTESLVEDGKSSIITLGQELDGRSRLSRANSVSNSKYPRLSRVVSRRSSQCIDGVEVY 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2100 548 SMART PP2C_4 145 455 IPR001932 -
Mibi04g2100 548 CDD PP2Cc 153 457 IPR001932 -
Mibi04g2100 548 MobiDBLite consensus disorder prediction 467 487 - -
Mibi04g2100 548 ProSiteProfiles PPM-type phosphatase domain profile. 154 457 IPR001932 -
Mibi04g2100 548 SUPERFAMILY PP2C-like 152 460 IPR036457 -
Mibi04g2100 548 MobiDBLite consensus disorder prediction 466 496 - -
Mibi04g2100 548 Gene3D - 149 459 IPR036457 -
Mibi04g2100 548 PANTHER PROTEIN PHOSPHATASE 152 455 - -
Mibi04g2100 548 Pfam Protein phosphatase 2C 177 435 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2100 Mibi-ChrMibi04 52553560 52558986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2100 104 486 PP2C-type Phosphatase Gene Family AT5G01700 48.969 2.41e-119 355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0303 11 4707488 4710128 Mibi04g2100 04 52553560 52558986 CCT