Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2083 ATGATGCATCATCACACTCTTCTTCAGCCTTTCACCTGGTCTGTCCCCAATGACATTTCCTCTGTTTTTGATCCCTTTGATCTTTCCTCCACCTTCTTCATTGAAGATAATTTCCAATTCCCAGTTGAAATGGGATCAGAAGCATCCAAATCCATAGAGAATTCCTACTTCAATGAATTTGAAGTTTCTTCTTTGTTCTTATCTCAATATAACAATTTCCAGCACCCAGTTCATAAAGAAGATATTCTAGGAATATCATCCATGGATTTGGGTACTCTTGACCATGAGTTGAGCAATCAATGTCTGAATATCCATGGAAACCCAGAAGAAAGGGAAGAAAGCTTTCATCTTTCCCAGAATCTATCTTCTGAAGAAGAAGATTCTTGGACTTCTACTTCATCCATGAAATCATCAGAATACTCCTCTCTCCAGCTGAACTTGCCTCAAGAAGGTGTGAAAATGGAAACTCAAGTGATTCTTCCCCATCTTATGGAAGCTCATGTTGAGGCAAAAGATCAGAACGAGAATTCTCTGGTAGAAGAAACCCTGAGATGCATACACCAGAAAACAAGCCCAATTGCAGAAGATCCTCATGAACGCCTAGCATTCCACTATTCATCCCAAAACATCACAGGAAATCTAGAAGGGCATTTCCTTAAACAGGAAGCTTGCAAAAATTCTGACACTGCATTCAAGGTATTTTACCAAACAACCCCACATGGAAAATTTGCCCATTTTGTAGCAAATTCAGCAATTTTAGAAGCTATACCATATGATTTAGAAGCTATACACATAATAGACTTTGATATGGAAGAGGGGGTCCAGTGGCCCCCTGTGATAGAGGCCATTTCTCAGATGAACAAAGTGCTGAAGTTAACATTAATCAAATGGGAAACAGAGCAAAAAAAATATGAGGAAACCATAAGGAGCCTTATTGAATACGCAAGATCATGTGGTCTCAAGATGCAGGTAGAAGAAAAGAGTTTTGAGGATTTAGTTACAGAACTCAAGAAGTTGAACAAAAGAGGTGGGAATGTGAAGAGAGATTTCCTAATCTTTAACTGCATGGTGGGTATTCCTCACATGGGGAGACGAAGAAGCAGAATTTCAGTCATGGAGTTTCTGAATTTAGGCAAGAACATGATCAACAATAGCACATGTAACAGGGGGATCATCACTTTTGGGGATGGAGAAGCAGACGAGAAGCTGAGAAATAGCCTAAATTTCAGGTCATTCTTTGAAGGTAACATGATGCATTACAAGGCCTTAATGGAATCAATTGAATCAAATTTCCCAGCTTGTTTCTTACAAGCAAGAACAGCAATAGAGTTCTTATTTGTGGGACCCTATGTGTCTTCCATTGCTTGGATTAAGAAGTGGGAAGAACTGAGAGGAAACTGCCAGTTTCAAGCAGGGAATGGATTTGGAATAGAGGGAATAAGACTAAGTGAAGGGATTTTAATGGAAGCTAGGGAAATGTTGAGAGGAAGCAGGGCAGGGACATATGAGGCAAGGATTGAAGGGCATAATGGGAATGAAATGGTTCTTTCATGGAAAGGGGCCCAGCTAGTCAAAGTGTCAACTTGGGGAAATCAAAAGGCTTGA 1605 0.4 MMHHHTLLQPFTWSVPNDISSVFDPFDLSSTFFIEDNFQFPVEMGSEASKSIENSYFNEFEVSSLFLSQYNNFQHPVHKEDILGISSMDLGTLDHELSNQCLNIHGNPEEREESFHLSQNLSSEEEDSWTSTSSMKSSEYSSLQLNLPQEGVKMETQVILPHLMEAHVEAKDQNENSLVEETLRCIHQKTSPIAEDPHERLAFHYSSQNITGNLEGHFLKQEACKNSDTAFKVFYQTTPHGKFAHFVANSAILEAIPYDLEAIHIIDFDMEEGVQWPPVIEAISQMNKVLKLTLIKWETEQKKYEETIRSLIEYARSCGLKMQVEEKSFEDLVTELKKLNKRGGNVKRDFLIFNCMVGIPHMGRRRSRISVMEFLNLGKNMINNSTCNRGIITFGDGEADEKLRNSLNFRSFFEGNMMHYKALMESIESNFPACFLQARTAIEFLFVGPYVSSIAWIKKWEELRGNCQFQAGNGFGIEGIRLSEGILMEAREMLRGSRAGTYEARIEGHNGNEMVLSWKGAQLVKVSTWGNQKA 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2083 534 Pfam GRAS domain family 165 529 IPR005202 -
Mibi04g2083 534 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 141 524 IPR005202 -
Mibi04g2083 534 Coils Coil 322 342 - -
Mibi04g2083 534 MobiDBLite consensus disorder prediction 121 135 - -
Mibi04g2083 534 MobiDBLite consensus disorder prediction 109 135 - -
Mibi04g2083 534 ProSiteProfiles GRAS family profile. 151 530 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2083 Mibi-ChrMibi04 52344324 52345928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2083 166 529 GRAS Transcription Factor Family AT5G66770 24.359 8.41e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi04g2083 GRAS 1.1e-38 CL0063