Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2082 ATGGCTGCATCTTCATCATGCTTAATTCTTCTCTCCCTCCTTCTAGTTGCAGCCAAGGCTCAAGAAAGTCCCCTGCTTTTCTTTGAGGGATTCAATACAAATGACCCATTTCTTCTTGAGGAAGCTGCACAAGTTACGAATGAGCGTATGCTTAGGCTCACAGACACATCCAACAATGTTGTAGGCCGTGCTTTCTATAACCAAAGCATTCAAATGCTTAACAATTCAGGCATACGACAAAAAGCTTCTTCCTTCAGCACACACTTTGTTTTCTCCATCGTCCCCTCAACCTCTGATCCTGGTGGCTTTGGCCTTGCTTTCTTCCTAGCACCTAATATGTCCATGTTTCAACAAGCTCAAGCGGCTCACTCTCTTGGTATTTATAGCAATTCCAATGATGTCAACAATAGTCACATATTCGCAGTGGAGTTCGATACGGTGGATGGCTCAGATCAAGGTGAGTCAGACTCAGCAGGGAACGATGTTGGGATCAATAATGGCACAAAGTCTGATATCTCTGTACCAGCTGCTTATATTGGGAGAGATTCCAAATTGGCTAATTTCAGTTTGGAGAAAGTTGATGCTGTACAAGCTTGGATAGATTATGATGGTGAAAAGAAAATAGTGAACGTGACCGTAGCTCCAATCACAGAGACTAAACCTTCCACACCACTTATATCAAATCGTCCCATTAATCTTACCACTGTTATAACCGAACAAATGTATGCTGGTTTCTCTGCATCAACAGGGGAGGGAAGTAAAACAAGCTCTCATTACATTCTTGGATGGAGTTTTGCAGTCAATGCAGATGCTAATCAACTTAACATTTCCAATCTTCCAAGCCCACCACCAAAATTGAAAGACCCTTATTCTTTTCCTTGGGTCAACTTTGCCATTGGAGTTTTGTCTGCTTTAACCTTGTTATTGTTGATTTCTTTGTGTTCTGTGACATTGTACAAGAGGTATACCAATTTTGAAGCTCTTGAGGATTGGGAGCTAGATTGTCCCCACAGATTTAGATACAGAGATCTTCACACAGCAACCAAAGGTTTCAAGGAGAGTGAGCTAATTGGAGTTGGAGGATTTGGTGCTGTCTACAAAGGTGTCTTACCTTCCACTGGAACTGAGGTTGCTGTGAAGAGGATTGTGAAAGGTCCAATCCAAGGAATGAGGGAATTTGCAGCAGAAATTGAAAGCTTAGGAAGGTTAAGACACAAGAACTTGGTGAATCTTCAAGGATGGTGCAAGCAAAAGAATGATCTTCTTCTCATCTATGACTTCATCCCTAATGGAAGCCTTGACGCTATCCTCTTCAAGCAAAGCCTTGTATTGAACTGGGAGCAAAGGTTCAATATCATCAAAGACATAGCTAATGGGCTGCTATATCTTCATGAAGAGTGGGAACAAGTGGTGGTCCATAGAGACATCAAAACCAGCAATATCCTCATAGATGCAGGTTTAAATGCTCGTTTAGGCGATTTCGGCCTCGCTAGGCTATATGATCATGGTGAAGCATCACACACAACCAATGTGGTGGGTACCATTGGGTACATAGCACCAGAACTGACTCGTACAGGAAAGGCATCCACAAGTTCTGACGTTTATGCCTTTGGGATTTTGCTCCTTGAAGTTGTTAGTGGGAGGAGGCCTATTGGGTCAGGACAATTCTTTTTGGTGGATTGGGTTGTGGAGAATCACAATATGGGTCAGATTCTTGAAGTGGTAGATCCCAAGTTGGGGTCAGATTATGTTGAGGAAGAGGTGGAATTAATCCTGAAACTGGGACTTCTCTGTGCACAACATAATGCAGATTCAAGGCCCACCATGAGACAAGTGATGAGGTACTTAAACTTTGATGACCATCTTCCAGATATTGGGGATTGGAGGAGGCAGACAGATTCAGATAGTGGAAGAATGAGCCTGGGTTTCTTAGAAATTATATCTATAAATAGTACCTCAACTTCATATAACTTAACCTCTAATAGTAGCATGAATAGTAAGCCTATCCAAGCTAGTAGATAG 2022 0.4224 MAASSSCLILLSLLLVAAKAQESPLLFFEGFNTNDPFLLEEAAQVTNERMLRLTDTSNNVVGRAFYNQSIQMLNNSGIRQKASSFSTHFVFSIVPSTSDPGGFGLAFFLAPNMSMFQQAQAAHSLGIYSNSNDVNNSHIFAVEFDTVDGSDQGESDSAGNDVGINNGTKSDISVPAAYIGRDSKLANFSLEKVDAVQAWIDYDGEKKIVNVTVAPITETKPSTPLISNRPINLTTVITEQMYAGFSASTGEGSKTSSHYILGWSFAVNADANQLNISNLPSPPPKLKDPYSFPWVNFAIGVLSALTLLLLISLCSVTLYKRYTNFEALEDWELDCPHRFRYRDLHTATKGFKESELIGVGGFGAVYKGVLPSTGTEVAVKRIVKGPIQGMREFAAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDFIPNGSLDAILFKQSLVLNWEQRFNIIKDIANGLLYLHEEWEQVVVHRDIKTSNILIDAGLNARLGDFGLARLYDHGEASHTTNVVGTIGYIAPELTRTGKASTSSDVYAFGILLLEVVSGRRPIGSGQFFLVDWVVENHNMGQILEVVDPKLGSDYVEEEVELILKLGLLCAQHNADSRPTMRQVMRYLNFDDHLPDIGDWRRQTDSDSGRMSLGFLEIISINSTSTSYNLTSNSSMNSKPIQASR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2082 673 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 268 IPR013320 -
Mibi04g2082 673 CDD lectin_legume_LecRK_Arcelin_ConA 28 268 IPR001220 GO:0030246
Mibi04g2082 673 Pfam Protein kinase domain 351 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2082 673 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
Mibi04g2082 673 FunFam Lectin-domain containing receptor kinase VI.3 336 427 - -
Mibi04g2082 673 CDD STKc_IRAK 357 617 - -
Mibi04g2082 673 ProSitePatterns Protein kinases ATP-binding region signature. 357 384 IPR017441 GO:0005524
Mibi04g2082 673 FunFam L-type lectin-domain containing receptor kinase S.4 428 628 - -
Mibi04g2082 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Mibi04g2082 673 PANTHER - 41 618 - -
Mibi04g2082 673 SUPERFAMILY Protein kinase-like (PK-like) 335 622 IPR011009 -
Mibi04g2082 673 ProSiteProfiles Protein kinase domain profile. 351 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2082 673 Pfam Legume lectin domain 28 280 IPR001220 GO:0030246
Mibi04g2082 673 Gene3D - 27 272 - -
Mibi04g2082 673 Gene3D Transferase(Phosphotransferase) domain 1 428 626 - -
Mibi04g2082 673 SMART serkin_6 351 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2082 Mibi-ChrMibi04 52282666 52284794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2082 26 642 Receptor kinase-like Gene Family AT5G01560 48.418 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi04g2082 Pkinase 2.7e-49 CL0016