Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2081 ATGATTTGTCAACTCACGCTCCCCGCCAAATCCCTATCATCGTTCATGATATCATATTCACAGAATCTGATGGCTTCATCATCATCAAAGCTTGGTTTCTTCCTTCTCCTTCTCTTTCTTTCTCTTCTAGTTGCGTCCAAGGCTCAACAAGAAACCCAGTTTTTATTTGAGGGATTCAGTAACAGTGAAAATCATCTAAAACTTGAAGGAGCTACAGTTGTGAAACCCAGTGGTTCGCTTAAACTCACCAACAGATCATACAATATTGTAGGCCATGCTTTCTATTACAAACCCTTTCAGATGCTTAACAGCAAAACCCAAAAACAGAAAGTTTCTTCCTTTAGCACATCCTTTGTTTTCTCCATTGTCCCTTCATCCTCTGGCCGTGGAGGTTTTGGACTTGCCTTTGTCATAGCTCCCTTAACTCAATTCCCATGGTCAAGCCCTGGCCATCTTCTTGGTCTTGTTAACTCCTCCAATGATGGCAATCCTTCAAATCACCTTTTCGTAGTCGAATTTGATACGGTAAATGGCTACAAAAGTGAGGCTGACAGTGAGGCAAACCATGTTGGGGTCAATATCAATGGCATGAACTCAAGTGTCAATGAACCAGCTGCTTATATTATAGAAGGCACAGACGCTCAGAAGGAAGAATTCAGCATGGAGGAATCTGATGCTGTACAAGCTTGGATAGATTATGATGGAGACAAGAAAATTGTGGACGTGACTATAGCTCCCATATCATTGCCTAACAAACCCTCCAAACCACTCATATCTCATTCTATTGACCTTCAGGAGGTTCTAAAAGAAACCATGTTTGTTGGTTTCTCAGCTTCAACTGGGGAAAGTAAAGCAAGCTCCCATTACATTCTGGGATGGAGCTTTTCAATCAATGGCCCTTCTGCTTCACTCAACAATTCTAGGCTTCCGGAGCCACCATTAAAAGAGAATGATCCAAGTTCAAATTCTTTCCCTTGGATCAAACTTGCCATTGGAGTTCTCTCTGCTTTAATCATAATATTGTTGCTTTCATTGTGTTCTGTAACATTGTACAGGAGGTACAACAATTTTGAAACTCTTGAGGATTGGGAACTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCATACAGCAACAAAAGGGTTCAAAGAGAGTGAGCTAATAGGACTCGGAGGTTTTGGCGCGGTGTACAAAGGTGTCTTGCCTTCCACAGGAACTGAGGTTGCCGTGAAGAGAATTGTGAGAGGTCCAATCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTGGGAAGATTAAGACATAAAAACTTGGTCAATCTTCAAGGATGGTGTAAGAGAAAGAACAGTGATCTTCTTCTAGTCTATGATTACATCTCCAATGGAAGCCTTGACTCACTCCTCTTCAATCCAAGCATTGTTCTGAGTTGGGATCAAAGGTTCAGTATCATCAAAGGCATAGCTAATGGGATATTATATCTTCATGAAGAGTGGGAGCAAGTGGTGATCCATAGAGACATCAAAACAGGAAATATTCTCATAGACGAAGATTTAAATGCTCGTGTAGGTGATTTTGGCCTAGCTAGGCTTTATGATCATGGTGAAGTATCTCACACAACCAATGTAGTTGGGACAATTGGGTATATAGCACCAGAATTGATCCGTACAGGAAAGGCATCCACAAGTTCAGATGTGTATGCTTATGGGGTTTTGCTTCTTGAAGTTGTTAGTGGGAGGAGACCTATTGAGTCTGAGCAGTTTTTCTTGTTAGATTGGGTTGTGCAGAATCAAAGATTGGGTCAGATTCTTGAAGTTGTTGACCCAAAGTTGGGTTTAAATTATGATGAAGAAGAGGTGGAATTGGTTCTGAAACTGGGTCTTATCTGTGCTCAACATAGAGCAGATTTAAGACCCACCATGAGACAGATTATAAGGTATCTGAACTTTGATGATCCTATTCCAGTTATTGGGGATTGGAGGGGACAAGTTACTTCTGAAAGTAGCAGAATGAGCTCAGGTTTTTTGGAAGTTGTGTCTGCAAGTACTATTTCAACTTCCTATAACTTATCTTCCATTGATTGTATGAGTAGTAGGGTAATAGAAGCTGGTAGGTAG 2121 0.4102 MICQLTLPAKSLSSFMISYSQNLMASSSSKLGFFLLLLFLSLLVASKAQQETQFLFEGFSNSENHLKLEGATVVKPSGSLKLTNRSYNIVGHAFYYKPFQMLNSKTQKQKVSSFSTSFVFSIVPSSSGRGGFGLAFVIAPLTQFPWSSPGHLLGLVNSSNDGNPSNHLFVVEFDTVNGYKSEADSEANHVGVNINGMNSSVNEPAAYIIEGTDAQKEEFSMEESDAVQAWIDYDGDKKIVDVTIAPISLPNKPSKPLISHSIDLQEVLKETMFVGFSASTGESKASSHYILGWSFSINGPSASLNNSRLPEPPLKENDPSSNSFPWIKLAIGVLSALIIILLLSLCSVTLYRRYNNFETLEDWELDCPHRFRYRDLHTATKGFKESELIGLGGFGAVYKGVLPSTGTEVAVKRIVRGPIQGMREFAAEIESLGRLRHKNLVNLQGWCKRKNSDLLLVYDYISNGSLDSLLFNPSIVLSWDQRFSIIKGIANGILYLHEEWEQVVIHRDIKTGNILIDEDLNARVGDFGLARLYDHGEVSHTTNVVGTIGYIAPELIRTGKASTSSDVYAYGVLLLEVVSGRRPIESEQFFLLDWVVQNQRLGQILEVVDPKLGLNYDEEEVELVLKLGLICAQHRADLRPTMRQIIRYLNFDDPIPVIGDWRGQVTSESSRMSSGFLEVVSASTISTSYNLSSIDCMSSRVIEAGR 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2081 706 ProSitePatterns Protein kinases ATP-binding region signature. 389 412 IPR017441 GO:0005524
Mibi04g2081 706 PANTHER - 45 651 - -
Mibi04g2081 706 FunFam L-type lectin-domain containing receptor kinase V.9 50 303 - -
Mibi04g2081 706 FunFam serine/threonine-protein kinase PBS1-like 352 460 - -
Mibi04g2081 706 FunFam L-type lectin-domain containing receptor kinase S.4 461 660 - -
Mibi04g2081 706 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 314 IPR013320 -
Mibi04g2081 706 Gene3D - 49 306 - -
Mibi04g2081 706 Gene3D Transferase(Phosphotransferase) domain 1 461 653 - -
Mibi04g2081 706 SMART serkin_6 383 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2081 706 Gene3D Phosphorylase Kinase; domain 1 368 460 - -
Mibi04g2081 706 CDD STKc_IRAK 389 650 - -
Mibi04g2081 706 Pfam Protein kinase domain 383 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2081 706 Pfam Legume lectin domain 52 309 IPR001220 GO:0030246
Mibi04g2081 706 ProSiteProfiles Protein kinase domain profile. 383 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2081 706 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Mibi04g2081 706 SUPERFAMILY Protein kinase-like (PK-like) 367 652 IPR011009 -
Mibi04g2081 706 CDD lectin_legume_LecRK_Arcelin_ConA 52 299 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2081 Mibi-ChrMibi04 52276878 52280790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2081 53 671 Receptor kinase-like Gene Family AT3G08870 51.987 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi04g2081 Pkinase 5.1e-48 CL0016