Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2080 ATGAATCTTCAAACCTCTCTAACCATTATTTTATCCTTCATTCTGATGGCTTCTTCTGCGGCATCATCATCATCAACGCTTAGTTTCTTCCTCCTCTTTCTTTCACTCTCAGTTGTAGCTAAGGCTCAACAAGAGGTCAATTCTAATTTTATATACCATGGATTCAATGATATTGATGAAACTGAGCTTATCCTTGAAGGAGCTACCATTGTCAAACCCAGTGGATTACTTAGGCTCACTGACACAACAAACAATATTTCAGGCCGTGCTTTCTACTCCCAACCTATTCAAATGCGTTCTAATTCAACCCCACATCAAAAAGCTTTTTCCTTTAGCACATCCTTTGTTTTCTCCATTGTCTCTTCAACCACTGAGTCAGGTGGGTTTGGCCTTGCTTTCGCCATAGCACCAAAACCTCATTTCCAAGAGGCTGAAGCTGAACACTATCTTGGTCTTTTTAATGGAAGAAATGAAGGGAACACTTCAAATCACATATTTGCAGTGGAATTTGATACGGTTAATGGCTTTGATAAAGGTGAGTCTGATACTGAAGGTAACGATGTTGGGGTCAATCTGAATGGCCTGACCTCAATCGTTGTGGAATCAGCATCTTACATTATTCAACAAGGCCCAGATGCTGGAAAGAAGGAAAACATTAGTTTGGAGCAAGTTGATGCTGTACAAGCTTGGATAGACTTTGATGGTGATCAGCAAATTGTGAATGTGACCATAGCTCCATTAGGACAACCTAAACCCTCCAAACCACTTATTTCCAATAATCCCATCAACCTTACTGGTAATTTAACGGAAATCGTGTATGTTGGTTTCTCTGCATCAACAGGGAGGAATAAAGCAAGCTCTCATTACATTCTGGGGTGGAGTTTTGCAGTCAATGCAGATGCTACTCCCCTTGACGCTTCCAAGCTTCCAAGTCCACCACCAAAAGTGAAAGGCCATTCCTCTTTCCCTTGGGTCAAATTTGCCATAGGAGTTTTGTCTGCTTTATCCTTAATATTGTTGATTTCTTTGTGTTCTGTAACATTGTACAAGAGGTACACCAATTTTGAAGTTCTTGAGGATTGGGAGCTAGATTGTCCCCACAGATTTAGATACAGAGATCTTCACACAGCAACCAAAGGTTTCAAAGAGAGTGAGCTAATAGGAGTTGGAGGTTTTGGTACTGTGTACAAAGGTGTTTTACCTTCCACTGGAACTGAAGTTGCTGTGAAGAGGATTGTTCGAAACCCAATCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCCTAGGAAGATTAAGACACAAGAATTTAGTCAATCTTCAAGGATGGTGTAAGCAAAAAAATAACCTCCTTCTAATCTATGATTATATCCCCAATGGAAGTCTTGACTCACTCCTCTATAATCAAAGCCTTGTTTTGAATTGGGAACAAAGGTTCAATATCATCAAAGGCATAGCTAATGGGCTATTGTATCTTCATGAAGAATGGGAGCAAGTGGTGGTCCATAGAGACATCAAAACCAGCAACATCCTCATTGATGCAGAGTTAAATGCACGTTTGGGCGATTTTGGCCTTGCTAGGCTGTATGATCATGGTGAAGCATCACACACAACCAGTGTAGTCGGGACAATTGGGTATATCGCTCCGGAATTGACTCGCACAGGAAGGGCTTCTACAAGTTCTGATGTGTATGCTTTTGGGATTTTGCTCCTTGAAGTGGTTAGTGGGAGGAGACCCATTGGCTCAGGGCAATTTTTTTTAGTGGATTGGGTCATTGAGAATTATCGCTTGGGTCAGATTCTTGAAGTTATTGATCCAAACTTGAACTCAGTTTATGCAGAAGAGGTGGAATTAGTTCTAAAACTGGGTCTTCTTTGTTCTCAATATAATGCTGACTCAAGGCCCACCATGAGACAGGTGACAAGGTACCTAAACTCTGATGACCCTCTTCCTAATATTGCTGGTATAAGGCACAAGTATTCTATGAGCAGTGGAAGGAGCTTGGATTTCTTTGAAGGTGAGAGTACTAGTGCTATCTCAACATCTCTTAATTCTTCCTCCATTTATGGCATGAATAGCATGTCTATAGAAGGAGGTAATTAG 2106 0.4103 MNLQTSLTIILSFILMASSAASSSSTLSFFLLFLSLSVVAKAQQEVNSNFIYHGFNDIDETELILEGATIVKPSGLLRLTDTTNNISGRAFYSQPIQMRSNSTPHQKAFSFSTSFVFSIVSSTTESGGFGLAFAIAPKPHFQEAEAEHYLGLFNGRNEGNTSNHIFAVEFDTVNGFDKGESDTEGNDVGVNLNGLTSIVVESASYIIQQGPDAGKKENISLEQVDAVQAWIDFDGDQQIVNVTIAPLGQPKPSKPLISNNPINLTGNLTEIVYVGFSASTGRNKASSHYILGWSFAVNADATPLDASKLPSPPPKVKGHSSFPWVKFAIGVLSALSLILLISLCSVTLYKRYTNFEVLEDWELDCPHRFRYRDLHTATKGFKESELIGVGGFGTVYKGVLPSTGTEVAVKRIVRNPIQGMREFAAEIESLGRLRHKNLVNLQGWCKQKNNLLLIYDYIPNGSLDSLLYNQSLVLNWEQRFNIIKGIANGLLYLHEEWEQVVVHRDIKTSNILIDAELNARLGDFGLARLYDHGEASHTTSVVGTIGYIAPELTRTGRASTSSDVYAFGILLLEVVSGRRPIGSGQFFLVDWVIENYRLGQILEVIDPNLNSVYAEEVELVLKLGLLCSQYNADSRPTMRQVTRYLNSDDPLPNIAGIRHKYSMSSGRSLDFFEGESTSAISTSLNSSSIYGMNSMSIEGGN 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2080 701 Pfam Protein kinase domain 381 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2080 701 Gene3D Phosphorylase Kinase; domain 1 366 457 - -
Mibi04g2080 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 49 314 IPR013320 -
Mibi04g2080 701 FunFam Lectin-domain containing receptor kinase VI.3 366 457 - -
Mibi04g2080 701 FunFam L-type lectin-domain containing receptor kinase V.9 47 300 - -
Mibi04g2080 701 Gene3D - 45 301 - -
Mibi04g2080 701 ProSitePatterns Protein kinases ATP-binding region signature. 387 410 IPR017441 GO:0005524
Mibi04g2080 701 Pfam Legume lectin domain 48 310 IPR001220 GO:0030246
Mibi04g2080 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Mibi04g2080 701 SUPERFAMILY Protein kinase-like (PK-like) 363 645 IPR011009 -
Mibi04g2080 701 CDD STKc_IRAK 387 646 - -
Mibi04g2080 701 ProSiteProfiles Protein kinase domain profile. 381 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2080 701 SMART serkin_6 381 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g2080 701 Gene3D Transferase(Phosphotransferase) domain 1 458 661 - -
Mibi04g2080 701 CDD lectin_legume_LecRK_Arcelin_ConA 49 298 IPR001220 GO:0030246
Mibi04g2080 701 PANTHER - 69 649 - -
Mibi04g2080 701 FunFam L-type lectin-domain containing receptor kinase S.4 458 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2080 Mibi-ChrMibi04 52258367 52261483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2080 50 654 Receptor kinase-like Gene Family AT5G01560 50.565 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi04g2080 Pkinase 1.2e-50 CL0016